Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1346 |
Symbol | |
ID | 4091940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1485725 |
End bp | 1488535 |
Gene Length | 2811 bp |
Protein Length | 936 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638014621 |
Product | ATP dependent DNA ligase |
Protein accession | YP_621225 |
Protein GI | 107022898 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase [COG3285] Predicted eukaryotic-type DNA primase |
TIGRFAM ID | [TIGR02776] DNA ligase D [TIGR02777] DNA ligase D, 3'-phosphoesterase domain [TIGR02778] DNA polymerase LigD, polymerase domain [TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.893044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGCA AGCTCGATCC GTATCGCCGC AAGCGCCATT TCGGCGCGAC GCCCGAGCCC GAAGGGGCGC ACGGCAAGCG TCGCGCGAAG CCGGATACGC AAGCGGCCTC GAAGCCGAAG GCGAAGCAGC CCGCCGCGCG CGCACGCCAT CCGCTGCGCT TCGTGATCCA GGAGCACCAC GCGCGCCGGC TGCACTACGA TTTCCGGCTC GAACTCGACG GCACGCTGAA ATCGTGGGCC GTGCCGAAGG GGCCGAGCTT CGATCCTCAG GTGAAGCGGC TCGCGGTGCA CGTCGAGGAC CATCCGCTCG AATACGCATC GTTCGAAGGC GAGATTCCGG CCGGGCATTA CGGTGCGGGC TCGGTCGTCG TGTGGGACGA AGGCACGTGG ACGCCCGATG GCGGCGTCGC GCAGGCGCGC GAAGGCTACC GGGCCGGCAA ACTGACGTTC CGGCTCGACG GCGAAAAGCT GCACGGCGGC TGGGCGCTCG TGCGCAGCGG GCGGCAGGAA GGGCGTCAGG AGCAGTGGCT GCTGATCAAG GAGCGCGACG ACGACGCGCG CAGCGCCGAT GAATTCGACG TCGTCGGCGA GCGGCCGGGT AGCGTGCATG ACGGCGCGGC CAACGGCGCG GCACGCAAGC GCGCTGCGCG GCGCGGCCGA TCGACCGACG CGGACGGCGA TGCACATGAC GCGCAACACG CAAGCCACGA AAGCCACGAA AGCCACGAAA GCCACGCAAG CCATCGCCCC ACCGACCCGT CGCAGGTCGA AGGCGCGGTG CGCGCGCCGC TGCCCGAGCG CGTCGCGCCC CAACTCGCGA CGCTGGTCGA TGCACCGCCG ACGCAGGGCG GCTGGTGCTA CGAACTGAAG TTCGACGGCT ACCGCATCCT GGCGCGCATC GCAGGCAAGG GCGCACGCCG GCGCGTCACG CTGATGACGC GCGAAGGCCG GGACTGGACC GCGAAACTGC GCGCGCAGCG CGACGCGCTC GCGGCGCTCG ACGTCGACGA CGCATGGCTC GACGGCGAGG CCGTCGTGCT CGGCGAGAAC GGCCTGCCCG ATTTCCAGGC GCTGCAGAAC GCGTTCGGCA CGGACCGCTC GGATGCGATC ACCTTCTTCG TGTTCGACCT GCCTTATCTC GACGGCTACG ACCTGCGCGA CGCGTCGCTC AACGATCGTC GCGCGCTGCT CGAACCGCTG CTCGCGAACA GCGACCCGGC GCGCGTGCGC TTTTCGCCCG ATCTCGGCGA GGACGTCGCG TCGCTGATCG CGAGCGCGTG CGACACCGGC CTCGAAGGAC TGATCGGAAA GCGCGCGGAC TCGCGCTATC GCGCCGGCCG GTCGCCCGCG TGGATCAAGC TCAAATGCCG GCGCCGGCAG GAGTTCGTGA TCGGCGGCTT TACCGAGCCG TCGGGCAGCC GGCACGGCTT CGGCGCGCTG CTGCTCGGCG TGCACGAGCC GGCGCCGGCC GGCAAGCGGC GGCGCGGGCC CGGGCCGCTG CGCTACGTCG GCCGCGTCGG CACCGGCTTC GATGCGCGGA TGCTCGACCG TCTCGCCGCG ATCCTGCGCA AACACGAGCG CGACACGATG CCGTTCGATG AACCGCCGCG CGAACGCACA CGCACCCGCG TGCACTGGGT CGAGCCGACG CTCGTCGCCG AATGCGAATT CGCGGAATGG ACTGGCGACG GGATCGTGCG GCAGGCCGCG TTCATCGCGC TGCGCGAGGA CAAGCCGGCG GCGCAGATCG TCCGCGAGAT GCCCAAACAC ACGGAAACGG AGGTGACGAT GGATCAACGC CCGACCCCGC ACGACGACAC ACGCAAGCGC GCATCGCATG CCGCTCGTGA AAGCGCCGAT CGCAAGCAAT CCGCACGGTC TCGCGCAGCG GCCCGCGCCG AAGACGACGC GTCCGGCCCC GACACGCTCG GCCGCGTACG CATCACGCAT CCCGAGCGCG TGCTCGACCC GCAAAGCGGC ACGCGCAAGA TCGACCTCGC GCGGTACTGG CAATGGGTCG CGCCGTGGCT GTTGCCCGAC CTCGAGGGCC GGCCGGTTTC GCTCGTGCGC GCCCCGGGCG ACATCGCCGG CGAGCTGTTC TTCCAGAAGC ACGCGGAGCG TCGCGAGATT CCGTTCGTCA CGCAGCACGA AGGGCTCGAC CCGGGCCACG GACCGCTGCT GTCGATCGAC AACGTCGACG CGCTGCTCGG CGCCGCGCAG ATGGGCACGG TCGAACTGCA CACGTGGAAC GCGCATGCGT CGAACATCGA GCGGCCCGAC CGCATCGTGT TCGACCTCGA TCCCGATCCG GCGCTGCCGT GGCGCACGAT GATCGACGCC GCGCAGCTCG TGCGCGGGCT GCTCGACGAG CTCGGGCTCG TGTCGTTCTG CAAGACGAGC GGCGGCAAGG GGCTGCACGT CGTCGTGCCG CTCACGCGGC ATGCGGGCTG GGACGACGTG AAGGACTTTT CGCGCGCGGT CGCGCAGCAC GTCGCCGGCA CGCTGCCCGA CCGCTTCACA GCGACGATGG GGCCGCGCCA CCGGCGCGGC AAGATCTTCG TCGACTACCT GCGCAACGGG CGCGGTGCGA GCACGATCGC CGCCTATTCG GTGCGCGCGC GGCCCGGCAT GGGCGTGTCG GTGCCGCTCG ACTGGGACGA GGTGCCTGAC ACGACGGGCG GCGCGCAATG GACGATCGAC ACGCTGCACG AACGGCTGGA CACGCTGAAG CGCGACCCGT GGGAAGGCTA CGCGAAGGCG CGCCAGCGCA TCACCGCGGC GATGCGGGCG CGGCTCGGCG CCGACACGTG A
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Protein sequence | MAGKLDPYRR KRHFGATPEP EGAHGKRRAK PDTQAASKPK AKQPAARARH PLRFVIQEHH ARRLHYDFRL ELDGTLKSWA VPKGPSFDPQ VKRLAVHVED HPLEYASFEG EIPAGHYGAG SVVVWDEGTW TPDGGVAQAR EGYRAGKLTF RLDGEKLHGG WALVRSGRQE GRQEQWLLIK ERDDDARSAD EFDVVGERPG SVHDGAANGA ARKRAARRGR STDADGDAHD AQHASHESHE SHESHASHRP TDPSQVEGAV RAPLPERVAP QLATLVDAPP TQGGWCYELK FDGYRILARI AGKGARRRVT LMTREGRDWT AKLRAQRDAL AALDVDDAWL DGEAVVLGEN GLPDFQALQN AFGTDRSDAI TFFVFDLPYL DGYDLRDASL NDRRALLEPL LANSDPARVR FSPDLGEDVA SLIASACDTG LEGLIGKRAD SRYRAGRSPA WIKLKCRRRQ EFVIGGFTEP SGSRHGFGAL LLGVHEPAPA GKRRRGPGPL RYVGRVGTGF DARMLDRLAA ILRKHERDTM PFDEPPRERT RTRVHWVEPT LVAECEFAEW TGDGIVRQAA FIALREDKPA AQIVREMPKH TETEVTMDQR PTPHDDTRKR ASHAARESAD RKQSARSRAA ARAEDDASGP DTLGRVRITH PERVLDPQSG TRKIDLARYW QWVAPWLLPD LEGRPVSLVR APGDIAGELF FQKHAERREI PFVTQHEGLD PGHGPLLSID NVDALLGAAQ MGTVELHTWN AHASNIERPD RIVFDLDPDP ALPWRTMIDA AQLVRGLLDE LGLVSFCKTS GGKGLHVVVP LTRHAGWDDV KDFSRAVAQH VAGTLPDRFT ATMGPRHRRG KIFVDYLRNG RGASTIAAYS VRARPGMGVS VPLDWDEVPD TTGGAQWTID TLHERLDTLK RDPWEGYAKA RQRITAAMRA RLGADT
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