Gene Bcen_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1341 
Symbol 
ID4091935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp1482120 
End bp1482668 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content69% 
IMG OID638014616 
Productpeptidase C56, PfpI 
Protein accessionYP_621220 
Protein GI107022893 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.927736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCA AGCTGGATCA TTGCAAGGTA GCGATTCTCG CGGTCGACGG TTTCGAGGAA 
GCCGAACTCG TCGAACCGCA GCGCGCGCTC GCGGCCGAAG GCGCGCAGGT GGACGTGATT 
TCGCAGAAGC GCGGCGAAAT CCAGGGTTTC CGGCACGTCG ACAAGGGCGA GCGCGTGAAG 
GTCGACCGCA CGTTCGACGA TGCACGCGAA GGCGACTACG ACGCGGTCGT GCTGCCGGGC 
GGCGTCATCA ACGGCGACGC GATCCGGATG GTGCCGGCCG CGCGCGAATT CGTGACGGCG 
GCCGTCGGCG CCGGCAAGCC AGTCGCGGCG ATCTGCCACG GCGGGTGGCT CCTCGTGTCG 
GCCGGGCTGG TCGAGGGCAA GACGATGACG AGCTGGCCGA GCCTGCAGGA CGATATCCGC 
CACGCGGGCG GCAAGTGGGT GGACGAGGAG GTCGTGCGCG ACGGCAACCT GATCACGAGC 
CGCAAGCCGG CCGATCTGCC CGCGTTCAAC GGCGCGCTGG TCGAGCGCCT CGCGTCGCGG 
GGGGCATGA
 
Protein sequence
MSGKLDHCKV AILAVDGFEE AELVEPQRAL AAEGAQVDVI SQKRGEIQGF RHVDKGERVK 
VDRTFDDARE GDYDAVVLPG GVINGDAIRM VPAAREFVTA AVGAGKPVAA ICHGGWLLVS 
AGLVEGKTMT SWPSLQDDIR HAGGKWVDEE VVRDGNLITS RKPADLPAFN GALVERLASR 
GA