Gene Bcen_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1307 
Symbol 
ID4091402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp1437275 
End bp1438225 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content66% 
IMG OID638014582 
Productcatechol 1,2-dioxygenase 
Protein accessionYP_621186 
Protein GI107022859 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3485] Protocatechuate 3,4-dioxygenase beta subunit 
TIGRFAM ID[TIGR02439] catechol 1,2-dioxygenase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCA AAGTTTTCGA CACGACGGAA GTGCAGGATC TGCTGAAGGC CGCATCGAAC 
GCGGCCGGGA ATCGCGGAAA TGGCACGAAC GGCGACGCAC GTACGCAGCA GATCGTGCTG 
CGCCTGCTCG GCGACCTGTT CAAGGCGATC GACGATCTCG ACATCACGCC CGACGAAGTG 
TGGGCCGGCG TGAACTACCT GAACAAACTT GGTCAGGATA GCGAAGCGGC GCTGCTCGCG 
GCCGGTCTCG GTCTCGAGAA ATATCTCGAC ATCCGGATGG ACGCCGCGGA CAAGGCGATC 
GGCCTCGACG GCGGCACGCC ACGCACGATC GAGGGGCCGC TGTACGTGGC GGGCGCCCCG 
GTGCGCGACG GCGTCGCGAA GATCGACCTC GATGCGGACG ACGGCGCGGG CCCGCTCGTG 
ATCCAAGGCA CGGTCACGGG CCTGGACGGC AAGCCGATCG CCGGCGCGGT GGTCGAATGC 
TGGCATGCGA ATTCGCACGG CTTCTATTCG CATTTCGACC CGACCGGCAA GCAGAGCGAC 
TTCAATCTGC GCGGCGCGGT GAGGACCGGC GCGGACGGCA AATACGAATT CCGCACGCTG 
ATGCCGGTCG GCTACGGCTG CCCGCCGCAG GGCGCGACGC AGCAACTGCT GAATCGCCTC 
GGCCGCCACG GCAACCGCCC CGCACACGTG CACTTCTTCG TCGACAGCCC CGCTCACCGC 
AAGCTGACGA CGCAGTTCAA CATCGACGGA GATCCGCTGA TCTGGGACGA CTTCGCGTAT 
GCGACGCGCG AGGAGCTGAT TCCACCCGTG ACCGAAAAGA CCGGCGGCAC CGCGCTCGGC 
ATGAAGGCCG ACGCGTACCA GGACATCGAG TTCAACTTCG TGCTGACGCC GCGCGTGCAG 
GGCAGGGACA ACCAGATCGT CGAACGCCTG CGCGCGTCCG CCACCGCATA A
 
Protein sequence
MSVKVFDTTE VQDLLKAASN AAGNRGNGTN GDARTQQIVL RLLGDLFKAI DDLDITPDEV 
WAGVNYLNKL GQDSEAALLA AGLGLEKYLD IRMDAADKAI GLDGGTPRTI EGPLYVAGAP 
VRDGVAKIDL DADDGAGPLV IQGTVTGLDG KPIAGAVVEC WHANSHGFYS HFDPTGKQSD 
FNLRGAVRTG ADGKYEFRTL MPVGYGCPPQ GATQQLLNRL GRHGNRPAHV HFFVDSPAHR 
KLTTQFNIDG DPLIWDDFAY ATREELIPPV TEKTGGTALG MKADAYQDIE FNFVLTPRVQ 
GRDNQIVERL RASATA