| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1298 |
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| Symbol | |
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| ID | 4091393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 1425818 |
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| End bp | 1426942 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638014573 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_621177 |
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| Protein GI | 107022850 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.394122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTCGGC GTCGCCCCGC TTTCTTCGCA GTCGCTTCCG CACTGCCCCT CGCGCTAGCC
GCCTGCAGCG GAAAAGCGCC GTCCGATCCG CGCACGGAGG CGCCGCTCGT GCGTACCGCC
GTCGTGCAGG CGGCCGTTCC CGCGTCCCGC TCGTTCACCG GCACCGTCGC CGCGCGCGTG
CAGAGCGATC TCGGCTTCCG GGTAGCCGGC AAGGTGCTGG AGCGGCTCGT CGATACCGGT
CAAACCGTCA AGCGCGGCCA GCCGCTGATG CGGCTCGACC CGGTCGACCT GAAGCTCGCG
GCGCGCGCCC GCGACGAAGC CGTCGCCGCC GCACGGGCGC GCGCGCGGCA GACCGCCGAG
GACGAAGCGC GCTACCGCGA CCTGCGCGGC ACCGGCGCGA TATCGGCATC GGCCTACGAC
CAGATCAAGG CCGCCGCCGA TGCCGCGAAA GCGCAACTGA GCGCCGCCGA GGCCGACGCC
GACGTCGCGC GCAACGCGAC CGGCTATGCG CAACTCGTCG CGGACGGCGA CGGCGTCGTC
ATGGAAACGC TCGCGGAGCC CGGCCAGGTC GTCAGCGCGG GGCAGCCGGT GGTGCGGCTC
GCGCACGCCG GCAGCCGCGA AGCCGTGATC CAGTTGCCCG AAACCCTGCG TCCGGCGATC
GGGTCGGTCG CGCAGGCCGG GCTGTTCGGC AAGCCGGACA TCAGCGTCCC CGCGACGCTG
CGCCAGCTTT CCGATACCGC GGATGCGAGA ACGCGTACTT TCGACGCGCG CTACGTGCTG
CAAGGCGCGC TGGCCGACGC CCCGCTGGGC GCGACCGTCA CGATCCGCAT CCCGGACGAC
GCGCGCGCGG CTTCGCAACG CGGCATGCAG GTGCCGATCG GCGCGCTGCT GGACGCGGGC
AAAGGGCCGG GCGTGTGGGT CGTCGCCGGC GAACCGGCCA AGGTGACGTG GCGGCCGGTC
AAGGTCGAGC ATCTCGACGA CGACAGCGCG CGCGTGGCCG GCGACGGCGC GCTCAAGCCA
GGCGAGCGCG TCGTCGCGCT CGGCGCGCAG CTGCTGCGCG AAGGCGAAGC GGTGCGCATG
TCCGCGCCGG CCGCGACGGT CGCGAGCGCA GGAGCACGGC CGTGA
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| Protein sequence | MVRRRPAFFA VASALPLALA ACSGKAPSDP RTEAPLVRTA VVQAAVPASR SFTGTVAARV
QSDLGFRVAG KVLERLVDTG QTVKRGQPLM RLDPVDLKLA ARARDEAVAA ARARARQTAE
DEARYRDLRG TGAISASAYD QIKAAADAAK AQLSAAEADA DVARNATGYA QLVADGDGVV
METLAEPGQV VSAGQPVVRL AHAGSREAVI QLPETLRPAI GSVAQAGLFG KPDISVPATL
RQLSDTADAR TRTFDARYVL QGALADAPLG ATVTIRIPDD ARAASQRGMQ VPIGALLDAG
KGPGVWVVAG EPAKVTWRPV KVEHLDDDSA RVAGDGALKP GERVVALGAQ LLREGEAVRM
SAPAATVASA GARP
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