Gene Bcen_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1297 
Symbol 
ID4090910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp1425118 
End bp1425735 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID638014572 
ProductTetR family transcriptional regulator 
Protein accessionYP_621176 
Protein GI107022849 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.843552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCGACCCTTC CCCGGCGCCC GCGCGCGGCC CGGCCGACCA CGACGTCCGC 
GACCAGATCG TGGCCGCCGC CACCGAGCAC TTCAGCCGGT ACGGCTATGA AAAGACGACC 
GTGTCGGACC TCGCGAAGGC GATCGGCTTC TCGAAGGCCT ATATCTACAA GTTCTTCGAG 
TCGAAGCAGG CGATCGGCGA GATGATCTGC GCGAACTGCC TGCGCGAAAT CGAGACGGAC 
GTGCGCGCGG CCGTCGCCGC GGCCGAGCTG CCCACCGAAA AGCTGCGGCG GCTCTTCAAG 
GTCTCTACCG AGGCGAGCCT CCGGCTGTTC TTCCACGACC GCAAGCTGTA CGACATCGCG 
GCGTCGGCCG CCACCGAAAA CTGGCAGTCG GTGCAGGCCT ACGAGGCACG CGTGCAGACG 
CTGTTGCAGG ACGTCCTCCA GGCAGGCCGG CAAAACGGCG AGTTCGAACG CAAGACGCCG 
CTGGACGAAA CCGCGACGGC GATCTACCTC GTGATGCGGC CGTACCTGAA CCCGCTGCTG 
CTCCAGTACA ACCTCGACAC GACCGACGCC GCGCCGGCCC AACTGTCCAG CCTCGTCCTG 
CGCAGCCTCG CGCCGTGA
 
Protein sequence
MKKIDPSPAP ARGPADHDVR DQIVAAATEH FSRYGYEKTT VSDLAKAIGF SKAYIYKFFE 
SKQAIGEMIC ANCLREIETD VRAAVAAAEL PTEKLRRLFK VSTEASLRLF FHDRKLYDIA 
ASAATENWQS VQAYEARVQT LLQDVLQAGR QNGEFERKTP LDETATAIYL VMRPYLNPLL 
LQYNLDTTDA APAQLSSLVL RSLAP