| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1296 |
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| Symbol | |
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| ID | 4090909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 1423580 |
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| End bp | 1425040 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638014571 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_621175 |
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| Protein GI | 107022848 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0398141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACCCA AACCCATCGT TGCCGCGGCG CTGGCCGCCA TCTTGTCGGC GGGGTGTGCC
GTCGGTCCCG ACTATGCGCG GCCGGACGTG GCGATGCCGC GGCAGTTCCA GGGGCAGCGC
GCCGTGGATC AGCGCCACGC GGCGGCCGAC GCCGATCTCG CGACGTGGTG GACGGGCTTC
GGCGATCCGC AATTGACGCG CTACATCACG CTGGCGCTCG CGCAGAACCT CGATCTTGCG
CAGGCCGCGG CGCGCGTCGC GCAGGCACGC GCGGGGCTCG GCGCGGCGAA TGCGGCGCTG
CTGCCGTCCG GCAATGTGAG CGGCCAGGCC GCACGCGTCT ACCAGTCGGT CGAAACGCCG
TTGGGGCAGG TGTTGAATGC GACGCCCGGT TTCGACCGTC ATGGCAACGA CTACGAGGCC
GATTTCAACG CGAGCTGGGA GCTGGATATA TTCGGCGGAT TGCGCCGCGG CCGCGAAGCG
GCGCTCGCCG ACTATCAGGC CTCCGAAGCG GCGGCGGTCG CGACGCGGCT CGCCGTCGCC
GCGCAAACGG CGGATACCTA CATCACGATT CGCGGGTTGC AGGGCCGGCT CGAGGTCGCG
CGGCACCAGG TGCAGACCGA GCAGGATCTG CTGTCGACCC TCAACCTGCT CTATGGAAAG
GGCCTCGCGG CGGAGCTTCA GGTGCGGCAG GCCGAAGGCG CGCTCGCGCA GGTTCGTGCC
ACGGTGCCGG TGCTCGAAGC GGCGCTGGAC GCGGCGATGA ATGCGCTCGA CGTGATGCTC
GGCGCGCAGC CCGGCACACA TCGCGCGGAA TTGCTCGACG GCGGCGAGGT ACCGGTCGCG
CCGCGGATCG CGGCGACCGG CACGCCCGGC GAACTGCTGC GGCGCCGGCC CGACCTGATC
GCCGCCGAGC GGCGCGTGGC GGCGTCGAAT GCACGCATCG GCGTGGCGAT CGCCGAGTAT
TACCCGAAGT TCTCGCTGGG CGGGTTGATC GGCAGCGCGA CGACGATGGG CGCGGGCAAC
CTGTTTGCCG GCGGCGCGAA CCAGGCTGCG GGCGTGCTCG GCTTGCGCTG GCGTCTGTTC
GATTTCGGCC GGATCAATGC GCAGATCGCG CAGGCCAAAG GGCAGGATGC CGAAATGCTG
GCTGCGTATC GGCTCGCGGC GCTGCATGCG ACCGAGGACG TCGAGAATGC GTTCTCCGCG
CTCGTCAAGC GTGACGAGCA GGCGGCGATT CTCGGTGACG GCGTGAAGTC GCTCGGCCGC
GCGCGGGCCG CGTCGTTCGC GGCTTACCAG AAAGGGGTGG TCAGCCTGAT CGAAGTGTTG
CAGGCGGACG AAAGCCTGCT GCGCGTATCC GACGAACGCG TGCAGGCGCG AACCGAATCG
GCGCGTGCTG CGGTTGCGGC GTTCAAGGCG CTCGGCGGTG GTTGGCAGGC GCCGGAAGCG
CAGGCTGTTG CGAGTCGGTA G
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| Protein sequence | MLPKPIVAAA LAAILSAGCA VGPDYARPDV AMPRQFQGQR AVDQRHAAAD ADLATWWTGF
GDPQLTRYIT LALAQNLDLA QAAARVAQAR AGLGAANAAL LPSGNVSGQA ARVYQSVETP
LGQVLNATPG FDRHGNDYEA DFNASWELDI FGGLRRGREA ALADYQASEA AAVATRLAVA
AQTADTYITI RGLQGRLEVA RHQVQTEQDL LSTLNLLYGK GLAAELQVRQ AEGALAQVRA
TVPVLEAALD AAMNALDVML GAQPGTHRAE LLDGGEVPVA PRIAATGTPG ELLRRRPDLI
AAERRVAASN ARIGVAIAEY YPKFSLGGLI GSATTMGAGN LFAGGANQAA GVLGLRWRLF
DFGRINAQIA QAKGQDAEML AAYRLAALHA TEDVENAFSA LVKRDEQAAI LGDGVKSLGR
ARAASFAAYQ KGVVSLIEVL QADESLLRVS DERVQARTES ARAAVAAFKA LGGGWQAPEA
QAVASR
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