Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1291 |
Symbol | |
ID | 4090904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1415271 |
End bp | 1417106 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638014566 |
Product | thiamine pyrophosphate protein |
Protein accession | YP_621170 |
Protein GI | 107022843 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.155181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAG TGGCGGATTT CATCGTCGAG CGACTGTACG ACTGGGGCGT GCGCCGCATC TACGGCTACC CGGGCGACGG CATCAACGGC TTTTTCGGCG CGCTGAACCG TGCGGACGGC AAGATCGAAT TCATCCAGGC GCGCCACGAG GAGATGGCAG CCTTCATGGC GTCCGCGCAT GCAAAATTTA CAGGCGAGCT CGGCGTATGC GTCGCGACGT CGGGCCCCGG CGCCGCGCAC CTCGTGACGG GCCTGTACGA CGCGCGGCTC GATCACATGC CGGTGCTCGC GATCGTCGGC CAGCAAGCGC GCGCGGCGCT CGGCGGCCAC TATCAGCAGG AGGTGGATCT TCCGGCGCTT TTCAAAGATG TTGCAGGCGC ATTCGTTCAG CTTGCGACGG TGCCGGGCCA GGTGCGCCAT CTGGTCGACC GCGCGGTGCG CACCGCGCTC GGCGCGCGCA CGGTCACCGC GCTCGTGCTG CCGAACGACC TGCAGGAGCT CGATTACGCG CCGCCGAAGC GTGCGCACGG CACCGTACAT TCGGGCGTCG GCTACACCGC GCCGAAAGTC GTGCCGTATG CGGACGACCT GCGGCGCGCG GCCGACGTGC TCAACGCGGG GTCGAAAGTC GCGATGCTGG TGGGTGCCGG CGCGCTGAAG GCGACCGACG AGGTGATCGC GGTGGCCGAC CGGCTCGGCG CGGGCGCCGC GAAAGCGCTG CTCGGCAAGG CCGCGCTGCC GGACGACCTG CCGTGGGTCA CCGGCTCGAT CGGGCTGCTC GGCACCAAGC CGAGCTACGA ACTGATGACC GAATGCGACA CGCTGCTGGT TATCGGCTCG GGTTTTCCGT ATTCGGAATT CCTGCCGAAG GAAGGCCAGG CGCGCGGCGT GCAGATCGAC CTGAAGGCCG ACATGCTGAG CCTGCGTTAC CCGATGGAAG TCAACCTCGT CGGCGACAGC GCCGAGACGC TGCGCGCGCT GCTGCCGCTG CTGAACGAGC GGCGCGACAC CGCGTGGCGC GACCGGATCG CGCAATGGAA CCATGACTGG CACGACGCGC TCGCGGCGCG CGCAGCTGCG AAGGCCAGCG CGGGGCGCGG CGTGAATCCG CAGCGCGCGT TTACCGAGCT GTCGCCGCGC CTGCCCGACG ACGTGATCCT GACGAGCGAT TCGGGCTCCT GCGCGAACTG GTATGCACGC GACCTGATGA TGCGGCGCGG GATGATGGGT TCGTTGTCCG GCGGCCTCGC GTCGATGGGC GCCGCGGTGC CCTACGCGAT CGCCGCGAAG TTCGCGTACC CGGTGCGCCC GGTGATCGCG ATGGTCGGCG ACGGCGCGAT GCAGATGAAC AACATGGCCG AGCTGATCAC GGTCGCGAAA TACTGGCGCC AGTGGCCCGA CCCGCGCTGG ATCTGCATGG TGCTGAACAA CGAGGACCTG AACCAGGTCA CGTGGGAGCA GCGCGTGATG GAGGGCGACC CGAAGTTCGA CGCGTCGCAG CAGATCCCGA ACGTGCCGTA CTACCGCTTC GCGACGCTGC TCGGCCTCAA GGGCATCTAC GTCGACGATC CGGAACAGCT CGGCGCCGCG TGGGACGAAG CGCTCGCGTC CGATCGGCCG GTCGTGCTCG AGGTGAAGAG CGACCCCGAA GTGCCGCCGC TGCCGCCGCA CGTGACGCTG CAGCAGGCGA AGCATTTCGC CGAAACGCTG GTGAAAGGCG ACCCGCGCGA GGGCAACGTG ATCGTCGAGA CCGCGCGGCA GGTGTTGTCG GCCGTGCTGC CGGGCAACGG CGAACATGGC GGCAAGAGCG GCAAGGGAGG GAAAGGCGAA TCGTAA
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Protein sequence | MATVADFIVE RLYDWGVRRI YGYPGDGING FFGALNRADG KIEFIQARHE EMAAFMASAH AKFTGELGVC VATSGPGAAH LVTGLYDARL DHMPVLAIVG QQARAALGGH YQQEVDLPAL FKDVAGAFVQ LATVPGQVRH LVDRAVRTAL GARTVTALVL PNDLQELDYA PPKRAHGTVH SGVGYTAPKV VPYADDLRRA ADVLNAGSKV AMLVGAGALK ATDEVIAVAD RLGAGAAKAL LGKAALPDDL PWVTGSIGLL GTKPSYELMT ECDTLLVIGS GFPYSEFLPK EGQARGVQID LKADMLSLRY PMEVNLVGDS AETLRALLPL LNERRDTAWR DRIAQWNHDW HDALAARAAA KASAGRGVNP QRAFTELSPR LPDDVILTSD SGSCANWYAR DLMMRRGMMG SLSGGLASMG AAVPYAIAAK FAYPVRPVIA MVGDGAMQMN NMAELITVAK YWRQWPDPRW ICMVLNNEDL NQVTWEQRVM EGDPKFDASQ QIPNVPYYRF ATLLGLKGIY VDDPEQLGAA WDEALASDRP VVLEVKSDPE VPPLPPHVTL QQAKHFAETL VKGDPREGNV IVETARQVLS AVLPGNGEHG GKSGKGGKGE S
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