| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1283 |
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| Symbol | |
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| ID | 4090896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 1409352 |
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| End bp | 1410779 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638014558 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_621162 |
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| Protein GI | 107022835 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.277079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGATG CGATCCTGTG CCCGTTGTCC GTTCGTGAGC GATGGTGCGT CGCGGTCCGG
CGCGCGTTGA CGCCCGGACC GCGACGCACC GGCGCGCCGG ACGCGTTCGC GCCGGCGGTG
GCCGGTGTCG CCCTGTCGAC GCCGATGAGG CCGATGGCGC CGATGCGCGT GCCTTGGCCG
GCGTTAGCGC CTGCGTTCCA GCGCTGGTCC ACCGCCATCG CCCGTGCAGG CGACGGCCAG
TCCGGCGGCG GCAGCGGCTC GGGCGCCGCG CCAGGCCGCA ACGGCGAGCA CTCGACCGAC
GCGCCGGGCG GCGGTGGCGG CGACGACCAT CCGCACGACG ACCGCGGCGG CCGCACCGGC
GGCGACGGGG ATGGCAACGA CGGCGAACGC AAGCGGCCCG GCAAGAAGCC GCTGATCATC
CTGGGCGCGG TGGTGTTGGT GCTGCTCATC GGCGGGCTCG TGTGGTGGTT CGCGACGCGC
AACCAGGAAA GCACCGACGA TGCGTATACC GACGGCAACG CGATCGCGGT CGCGCCGCAC
GTGTCCGGCT ACGTGACGCG CCTGGCGGTC GACGACAACA CCTTCGTGCG GCGCGGCGAC
GTGCTCGTCG AGATCGATCC GCGCGACTAC CGCGCGCAGG TCGACGCGGC GCAGGCCCAG
CTCGGTCTCG CGCAGGCGCA GCTCGACGCG GCGCGCGTGC AGCTCGATAT CGCGCGCGTG
CAGTATCCGG CCCAGTACCG GCAGGCGCGC GCGCAGATCG AATCGGCGGA AGCCGCGTAC
CGGCAGGCGC TCGCCGCGCA GTCCCGCCAG CGGGCGGTCG ATGCGCGCGC AACCTCGCAG
CAGGCGATCG ACGCGGCCGA TGCGCAGCGC GCGACCGCCG ACGCGAACGT CGCGATGGCC
CAGGCGCAGG CCCGCACCGC GAGCCTCGTG CCGCAGCAGA TCCGGCAGGC CGAGACCGCC
GTCGAGGAAC GCCGCCAGCA GGTGCTGCAG GCACGCGCGC AGCTCGAGAC GGCCAACCTG
AACCTGTCGT ACTGCGAGAT GCGCGCGCCG TCCGACGGCT GGGTCACGCG GCGCAACGTG
CAACTGGGCT CGTTCCTGCA ACCGGGCACG TCGATCTTCT CGATCGTCAC GCCGCGCGTG
TGGGTCACCG CGAATTTCAA GGAGTCGCAG CTCGAGCGGA TGCGCATCGG CGACCGCGTC
GACGTGTCGG TCGACGCGTA TCCCGATCTC GACCTGCACG GCCACGTCGA CAGCATCCAG
CTCGGCAGCG GCTCGCGTTT CTCCGCGTTC CCGACCGAGA ACGCGACTGG CAACTTCGTG
AAGATCGTGC AGCGCGTGCC GGTGAAGATC GTGCTCGACG GCCCGCTGCC GACCCGTCCA
CCGCTCGGTC TCGGCCTGTC GGCCGTGCCG ACCGTTCACC TCAAATGA
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| Protein sequence | MPDAILCPLS VRERWCVAVR RALTPGPRRT GAPDAFAPAV AGVALSTPMR PMAPMRVPWP
ALAPAFQRWS TAIARAGDGQ SGGGSGSGAA PGRNGEHSTD APGGGGGDDH PHDDRGGRTG
GDGDGNDGER KRPGKKPLII LGAVVLVLLI GGLVWWFATR NQESTDDAYT DGNAIAVAPH
VSGYVTRLAV DDNTFVRRGD VLVEIDPRDY RAQVDAAQAQ LGLAQAQLDA ARVQLDIARV
QYPAQYRQAR AQIESAEAAY RQALAAQSRQ RAVDARATSQ QAIDAADAQR ATADANVAMA
QAQARTASLV PQQIRQAETA VEERRQQVLQ ARAQLETANL NLSYCEMRAP SDGWVTRRNV
QLGSFLQPGT SIFSIVTPRV WVTANFKESQ LERMRIGDRV DVSVDAYPDL DLHGHVDSIQ
LGSGSRFSAF PTENATGNFV KIVQRVPVKI VLDGPLPTRP PLGLGLSAVP TVHLK
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