Gene Bcen_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1257 
Symbol 
ID4092796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1383765 
End bp1384826 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID638014532 
Productinner-membrane translocator 
Protein accessionYP_621136 
Protein GI107022809 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCG TGACTTCTTC TTCCGCTGTG CGTCAAGCCG CATCCGTCGA ACGGTCGTCG 
CGCCGCGGGC CGGCACGCAT CCGCGATGCG CTCGAGCGGA CGGGCATCCT GCTCGTGCTG
GCCGTTCTCG TGGTCGTGTT CGCGCTCAGG GAGCCTGCGT TCCTGAACCT CGACAATCTG
TTCAGCATCC TCCAGGCGGT GTCGATCGTC GCGTTGCTCG GCATCGGCGT GACGGTCACG
CTCGCGGCCG GCGGCTTCGA CCTGTCGGTC GGCAGCGTGG CCGCGACCGC GCAGATGGCC
GCGAGCTACG TGCTGGTCGT CTGGCACGGA AGCGCGTGGG CGGCCGTGTT CGCCTGTGTC
GTGCTCGGCG TGGCCGCCGG CTTGTTCAAC GGCTTGCTGA TCACGCGGCT GCGGGTGCCC
GACCAGCTCG CGACGCTCGG CACGCTGTTC CTGCTGGCCG GCCTGCAGTT GATCCCGACC
GGTGGCCGCT CGCTCGCGAC CGGCTCCGTG CTGCCCGACG GCACGGACGC GACGGGCGTG
TTCCCCGACG CGTTCCTCGC GCTCGGCCGG CTGCGCGTGT TCGACGTCGT ACCGTTGCCG
GTGCTGCTGC TCGCGGCGGT GACGGTGCTG GCCTGCGTCA CGATGGAAGC GACGCGCTGG
GGCCGCGTGA TCTATGCGAT CGGCGGCAAC GAAACGGCTG CGCGATTGGC CGGTGCGCCG
GCCGCGCGCT ACCGTATCGC CGCGTATGTC GTGTCGGGCG CGATCGCGTC GCTGGGCGGC
GTGCTGATCG CCGCGCGGGT CGGCCGCGGC GACGTCAGCG CGGGCCATTC GCTGCTGCTC
GACGCGGTGG CCGCCGCGCT GATCGGTTAC GCGGTGTGGG GCGCGAAGCG GCCCAACGTG
TTCGGCACGG TCGTCGGCGC GGTGTTCGTC GGCGTGCTGC TCAACGGGCT GACGATGCTG
AACGCTCCCT ACTATATGCA GGACTTCATC AAGGGCGTGC TGCTCGTGTT GGCCCTCGCG
TTTACGTTCG GCATCGGTCG TCGGGCGGAT GCCCGGGCGT GA
 
Protein sequence
MKPVTSSSAV RQAASVERSS RRGPARIRDA LERTGILLVL AVLVVVFALR EPAFLNLDNL 
FSILQAVSIV ALLGIGVTVT LAAGGFDLSV GSVAATAQMA ASYVLVVWHG SAWAAVFACV
VLGVAAGLFN GLLITRLRVP DQLATLGTLF LLAGLQLIPT GGRSLATGSV LPDGTDATGV
FPDAFLALGR LRVFDVVPLP VLLLAAVTVL ACVTMEATRW GRVIYAIGGN ETAARLAGAP
AARYRIAAYV VSGAIASLGG VLIAARVGRG DVSAGHSLLL DAVAAALIGY AVWGAKRPNV
FGTVVGAVFV GVLLNGLTML NAPYYMQDFI KGVLLVLALA FTFGIGRRAD ARA