Gene Bcen_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1253 
Symbol 
ID4092792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp1379768 
End bp1380733 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content70% 
IMG OID638014528 
Productoxidoreductase 
Protein accessionYP_621132 
Protein GI107022805 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.619751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGCA GGCAGCATCC CCTTCATTCC GGATTCGACG CCGCCTCGAC GGCGAGCGAC 
GTCCTGGCCG GCCTCGATCT GCACGGCAAG ACCGCCATCG TCACGGGCGG CCATTCGGGT 
CTCGGCCTCG AAACCACGCG GGCACTGGCG CAGGCCGGTG CGCACGTCGT CGTCGGCGCA 
CGGAGCGCCG CGGCCGCGCG CGAAGCGACG CGCGGCATCG CGGGCGTGGA GGTCGCGCCG 
CTCGAACTCG CGGACGCCGC GAGCGTGGCC GCATTCGCCG CGCGGTTCGT CGATGCGGGA 
CGCCACGTGC ATATCGTCAT CAACAGCGCG GGCATCATGG CGTGCCCGGA GACTCGCTTG 
GGCGACGGTC GGGAAGCGCA GTTGGCCGTC AATCACCTCG GTCACTACGC GCTCGTCAAC 
CGGCTGTGGC CCGTGCTCGC GCATGGCGAC GGCGCCCGCG TGGTGGCGGT GTCGTCGCTC 
GGGCACCGGC TGTCGCCGAT TCGCTGGGAC GATATCGATT TCGCGCGCGG TTACGACAAA 
TGGCTCGCGT ACGGGCAGTC GAAAACCGCC AATGCGTTGT TCGCGGTGCA GCTCGACATG 
CTCGGCGCGC CGTTCGGCGT CCGCGCGTAT TCGCTGCATC CGGGCAAGAT CGCGACGCCG 
CTGCAGCGTC ATTTGACGCG CGAGGAAATG ATGGCGCAGG GCTGGGTCGA CGAACACGGC 
GTGCCGATCG ATCCGACGTT CAAGACGCCC GCGCAGGGAG CGGCAACGCA GGTATGGGCG 
GCGACGTCGC CGCGCCTGGC CGATCTCGGC GGTGTCTATT GCGAGGATTG CGATGTTGCG 
GCGGTGACCC GCGGCAACGA GGAATCGGGC GTGCGCCCGC ACGCGATCGA TCCGGAGGAG 
GCGGCGCGGC TGTGGGCGTG GTCCGCGGCA GCGACGGGCG TCGATGCCTT TGCGGCGCGG 
GGCTGA
 
Protein sequence
MTSRQHPLHS GFDAASTASD VLAGLDLHGK TAIVTGGHSG LGLETTRALA QAGAHVVVGA 
RSAAAAREAT RGIAGVEVAP LELADAASVA AFAARFVDAG RHVHIVINSA GIMACPETRL 
GDGREAQLAV NHLGHYALVN RLWPVLAHGD GARVVAVSSL GHRLSPIRWD DIDFARGYDK 
WLAYGQSKTA NALFAVQLDM LGAPFGVRAY SLHPGKIATP LQRHLTREEM MAQGWVDEHG 
VPIDPTFKTP AQGAATQVWA ATSPRLADLG GVYCEDCDVA AVTRGNEESG VRPHAIDPEE 
AARLWAWSAA ATGVDAFAAR G