Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1246 |
Symbol | |
ID | 4092785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1374027 |
End bp | 1375034 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638014522 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_621126 |
Protein GI | 107022799 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.927114 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCATCCG ACGAAGTTTC CGAATCGCGC CGCAAATGGG TGCAAGGCAC GACGGCCGGA CTGGTCGCCA GCGTCGCCCT GCCGACGCTC GCGCAGACGG GCGGCGGCGC GCCCGACGCC GGCGATACGG CGCCGCGCGA TCCGCGCACG CTTTATCCGC ATGCGCCGTT TCCGCAACAG CAGCAGCCCT GGCCGGGCCT CGCGGGCCGC ATGACGCCGC GCCCCGATCA CGGCGAGCGC AGTTATCGCG GCAGCGGCCG GCTCGACGGC CGCAAGGCGC TGATCACCGG CGGCGACTCG GGCATCGGCC GCGCGGTGGC GATTGCCTGT GCACGAGAAG GCGCGGACGT CGCGATCGTC TATCTGCCCG ACGAGGAGCC CGATGCGCGC GAAGTCGTGG ACCAGATCCG CGGCGCGGGA CGCAAGGCGG TGCCGCTGCC GGTCGACATT CGCAGTGAAG GCGCGTGCAA CGGCCTCGTC GAACGGGCGG TCGCCGCGCT CGGCGGGCTC GACATTCTGG TGAACAACGC GGGCCGCCAG CAGAGCCACG AATCGATCCT CGACATCAGC ACCGAGCAGT TCGACTGGAC GCTGCGCACC AACCTTTACG CGATGTTCTG GATCACGCGG GCCGCCATTC CACACATGCC GCCCGGTTCG GCGATCGTCA ACACGACGTC GGTCAATGCG TACGACCCGT CGGCGAACCT GCTGGACTAC GCGATGACGA AAGCGGCGAT CGCGAATTTC ACGAAGGGGC TCGCGAAGCA GATGATCAAG CGCGGCATCC GCGTCAACGG CGTCGCGCCG GGGCCGTTCT GGACGCCGTT GCAGGTCAGC GGCGGGCAGA CGACGCACAA CGTGGAGACG TTCGGCGAAC AGGTGCCGAT GGGGCGGCCG GGGCAACCGG CCGAGATCGC GTCGATCTAC GTCGAGCTGC TTTCGTCGCG TTCGAGCTAC GTGACCGGGC AGATCTATGG CGCGTCGGGT GGGGCGGGGC AGCCTTAG
|
Protein sequence | MSSDEVSESR RKWVQGTTAG LVASVALPTL AQTGGGAPDA GDTAPRDPRT LYPHAPFPQQ QQPWPGLAGR MTPRPDHGER SYRGSGRLDG RKALITGGDS GIGRAVAIAC AREGADVAIV YLPDEEPDAR EVVDQIRGAG RKAVPLPVDI RSEGACNGLV ERAVAALGGL DILVNNAGRQ QSHESILDIS TEQFDWTLRT NLYAMFWITR AAIPHMPPGS AIVNTTSVNA YDPSANLLDY AMTKAAIANF TKGLAKQMIK RGIRVNGVAP GPFWTPLQVS GGQTTHNVET FGEQVPMGRP GQPAEIASIY VELLSSRSSY VTGQIYGASG GAGQP
|
| |