Gene Bcen_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1235 
Symbol 
ID4093408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp1362205 
End bp1363194 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID638014511 
ProductABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein 
Protein accessionYP_621115 
Protein GI107022788 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTCAA TGTCGGCGGC ACGTCGCCGC CTGCTGCTTG CCGGCGCCGC CATCGCGGCG 
CACCCATTGG CCGCGTTCGC CGCGCCGGCC GCCGACGCCG ATCTGGCCGG CACGACGTTG 
CGCGTCGCGA CCTACAAGGG CGGTTGGCGC GCGCTGTTGC AGGCGGCCGG GCTCGCCGAC 
ATGCCGTACC GGATCGACTG GCGCGAACTG AACAACGGCG TGCTGCATAT CGAGGCACTC 
AACGCGGACG CGCTCGATAT CGGTTCGGGT AGCGAAATTC CGGCCGTGTT CGCCGCGCGC 
CAGAAGGCCA ACGTGCGATT CATCTCGCGC GTGCGCGAAG ACCTGAACAA CCAGGTCACG 
CTCGCGCGCA AGGACACGCC GATCCGCGGC ATCGCGGATC TGAAGGGCAA GCGCGTCGGC 
TACGTGCGCG CGACGACGTC GCACTATTTC CTGTATCGAC AGCTGGCGGA AGCCGGCCTG 
ACCTTCGACG ACATCCAGCC GATCAACCTG TCGCCGACCG ACGGGCTGTC CGCGTACGAT 
CGCGGCGACA TCGATGCGTG GGCGATCTAC GGCTACAACG GCCAGCTCGC GCGCAATCGC 
TACGACGCCC GTGTGCTGAA GACGGGGAAG GGGTATCTGT CGGGCAATTT TCCGGTGTAC 
GCGAATCCGC GCACGCTCGA CGATGCGCGT CGCCGCGCGG CGACGGGCGA TCTGCTGCTG 
CGGTTTCGAC GTGCGTATGC GTGGGCGAAC GGGCATTTCC GCGACTATGC GCTCGCGCAG 
AATCGCGAGA CGCGTGTGCC GGTTGCCGAT CTCGTCGCGA TGTTCGACCA GCGCAGCGAA 
GACTTCGCGC TGCTGCCGGT GACGCCCGAC GTGGTCGCGC AGCACCAGCA GGTCGCGGAC 
GTGTTTGCCC GCATCGGCGT GCTGGACGGG CCGGCCCATG TCGCGCCGTT CTGGGACACG 
TCGTTCAATC CGCTGGTTGC GGCGGGGTGA
 
Protein sequence
MSSMSAARRR LLLAGAAIAA HPLAAFAAPA ADADLAGTTL RVATYKGGWR ALLQAAGLAD 
MPYRIDWREL NNGVLHIEAL NADALDIGSG SEIPAVFAAR QKANVRFISR VREDLNNQVT 
LARKDTPIRG IADLKGKRVG YVRATTSHYF LYRQLAEAGL TFDDIQPINL SPTDGLSAYD 
RGDIDAWAIY GYNGQLARNR YDARVLKTGK GYLSGNFPVY ANPRTLDDAR RRAATGDLLL 
RFRRAYAWAN GHFRDYALAQ NRETRVPVAD LVAMFDQRSE DFALLPVTPD VVAQHQQVAD 
VFARIGVLDG PAHVAPFWDT SFNPLVAAG