| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1231 |
|---|
| Symbol | |
|---|
| ID | 4093404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 1356181 |
|---|
| End bp | 1357062 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638014507 |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
|---|
| Protein accession | YP_621111 |
|---|
| Protein GI | 107022784 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGG CTAACCTTAA TGTGGCGGGA AAGAAGACAA TTTCGATTGT GGATATCGTT
CATTCTCGAT TCTGGCCGGT CCAATCGTTG GTCCCCCAAT TTGACGGCGA TATGGTCCAA
TTGGTCCAAC AATTTGAAGA AGTCAAACCG CATCTGAAGC CAACGGGGAA CGGTTTGTCG
CTCGCGGAGG CCACCATCTT GGCCCCGATC GATCAGCCGC GTCGCAACAT CTTCTGTGTC
GGCAAGAACT ATCACGAGCA TGCGGCCGAG TTCCAGAACT CGGGATTCGA CAGCAGCGCA
AAGAACGGCG AGCACGCGCC GGAGGCGCCG GTCATTTTCA CCAAGCCGGC GTCGACGGTG
ATCGGGCCGT CGGCAAAGAT CCCACGACAT GTCGGCGTGA CCGCTCAGCT CGACTACGAG
GCCGAGCTGG GTGTCGTGAT CGGCAAGGGC GGCCGGGGTA TCAAGAAGGC GGACGCAATG
AATTACGTCT TCGGCTACAC CGTGATCAAC GACTTCACCG CTCGGGATCT TCAGAAGCTT
CACCGCCAGT GGTTCCTCGG AAAGTCGCTC GACGGCTTCT GTCCGATGGG GCCGTTCGTG
ATCACGTCGG ACGAAGTCAA CGGCCAGAAC ATCGACATCA AGTGTTGGGT GAACGGCGAA
TTGCGTCAGA ACTCCAACAC GTCCAAGCTG ATCTTTGATA TCCCGACGCT GATCGAAACC
CTGTCGGCCG GCATCGAACT TCAGCCGGGT GATGTGATTG CGACCGGTAC CCCGGCCGGC
GTCGGTATCG GCTTCAATCC ACCCAAATTC CTGCAGAAGG GTGATGTGAT CCGAATCGAG
ATCCAGAACG TCGGTGTACT CGAGAATGAG GTGGGCGAAT GA
|
|---|
| Protein sequence | MKLANLNVAG KKTISIVDIV HSRFWPVQSL VPQFDGDMVQ LVQQFEEVKP HLKPTGNGLS
LAEATILAPI DQPRRNIFCV GKNYHEHAAE FQNSGFDSSA KNGEHAPEAP VIFTKPASTV
IGPSAKIPRH VGVTAQLDYE AELGVVIGKG GRGIKKADAM NYVFGYTVIN DFTARDLQKL
HRQWFLGKSL DGFCPMGPFV ITSDEVNGQN IDIKCWVNGE LRQNSNTSKL IFDIPTLIET
LSAGIELQPG DVIATGTPAG VGIGFNPPKF LQKGDVIRIE IQNVGVLENE VGE
|
|---|
| |