Gene Bcen_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1175 
Symbol 
ID4092615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1292473 
End bp1294722 
Gene Length2250 bp 
Protein Length749 aa 
Translation table11 
GC content66% 
IMG OID638014451 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_621055 
Protein GI107022728 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4774] Outer membrane receptor for monomeric catechols 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCGA ATGATTGTCG TTTTCAACTA CACAAGATAA AATTCACCCA ACAACACAAA 
CCACCGCGCA ACGGCCATGT GAGGCAATCA CTCAGTCATC CTCAAATTTC CATGTCGAAA
CGACAGATCT CCGGGCGGCG TTTTCCTGTG CTGGCCCTGT CGCTGTGCTC GATCGCCGGC
GTTGCTTCCT CCCCTGCTCC AGCAGCCGAG TTCGACGACG AACTGCCTGC GGTCGAAGTA
CGCAGCCGTC GTCATCCAAA CGATCCGCGC GCCGAAAGCG TGAGTACGGC GACGCGCACC
GCGAGCGATC CGCGCGACGT ACCGCAAACC ATCGACAGCG TCCCGGTAGA GGAAACGCTG
TCCTATGGCG GTCGCACGCT GGCCGACGCG CTGGCCGGCG TGCCCGGTGT GTCCAATACG
TCGGACACGC GCTTCGATTC GTTCCGCATT CGCGGCTTTT CCGCCGCGGG CGACCTGCTG
CTCGACGGCA TGCGCGACGA TGCGCAATAC GTGCGCAGTC TCAGCAACAT CGAACGCGTC
GAAGTGCTGA AGGGGCCGGC AGCGGCGCTG TACGGGCGCG GCAGCGGCGG CGGCGTCATC
AACCGGATCA CCAAGCAGCC GTTGCCGGAA AACTTCGGGC ATCTGTCGGC GGCGACCGGC
AGCTATGGAC GGCTCGGCGC GTCGGTCGAT CTCAACCGGA TGCTGTCGAG CGCATGGAGC
GTGCGGCTCA ATGCCGGACG CGAACACGCA GGCAGCTTCC GCGACCACGT CGACAGCACG
CGTCAGTACG TCGCACCGTC GATCAAATGG CACGACGCGC GGCGCAGCTG GCTGCTGCAG
TTCGAATACG ACGCGTACCG GCGCGTGCCC GATCGCGGCA TGCCGGCGCC GGTCGCCGCG
CTCGACGCGG CCGGCAAGCC GTTCGCGTTC TCGCTGCCGT CCGCGCCACG CGCAACCTTC
TTCGGCGCGG CGGGCCGCGA CACGATTCGC GACGAGAACA TGAACTGGCG CTCGGTCTTC
ACGCACGCGC TCGACGGCGA CTGGGAATTG CGCCATACGC TCGGCGTGCT GAATTTGCGC
AGCACCTTCG ACAATACCTA CGTCACGCAA AGCTACGTCG CGAAGCCGCG CGACTACCGG
CATGTGCAAC GCGCACGCTA TCTGCAGGAC ATGACGCATC TCAACGTCCA GACCGGCGTC
GAACTGGGCG GCAAGGTCGC AACCGGTCCG GCGCTGCATC ACCTGCTGTT CGGTATCGAA
TACGGCTGGC AGAAACGCGC GCCGACGCTC TGGCAGGCCG ACGCGGCGCC GATTCCGGTG
ACCGGGCCGG ATCGTTTCGC CCTGGTCGGC TCGACGCCGC GCCCGTATGC GATGAACCGC
CACCGCGTCA GCGACTACGC GATCTTCGCG CAGGATCGCG TCGACCTCGG GCGAGCGTGG
AAGCTCCTCG GCGGCCTGCG CGGGGAACGT TTCGACGTCG ATTCGACCAA CGCGCTGAAC
GGCCTGCATG CACGGCGCAC GACGGCGGCA TGGAGCCCGC GGCTCGGCGT CGTGTGGTCG
CCGGTCGGCA CGCACAGCCT GTATGCGTCG TACAGCAAGA ACTTCGCGCC GGTCGGTGGC
GACCTGATCG GCATCACGCC CGACGCGCGC GGCAACGCCA ACGACCTCGG CCCGCAATAC
ACGCGCCAAT ACGAGATCGG CGTGAAAAGC GACTGGCGCG ACGGCGCGCT GAGCACGACG
CTCGCGCTGT TTCAGCTCGA CCTGTACAAC CGCCGCATCG CCGATCCGGT TCGGCCGGGC
TTTTTCGACC TCACCGGCCT CGAGCGCAAT CGCGGCCTGG AACTGGGCGT CGCCGGCCGG
CTCGCGGGCG ACTGGTTCGT CCGCGGCGGC ATCGGCTGGC AACACGCGCG GGTGGTCGAC
GCCGAGCCGA AGTACGCGGG CAAGCGCTCG GCGGGCGTGT CGGCGTCGAA CGGCAGCCTG
TTCGTCGGCC ATGCGCCGCT ACGCGGTTTT TTCGCGGAAC TCGGGCTGGT GTACGAAGGC
GCGCGTTACG CCGATCGCGA CAACCTGCTC GAATTGCCCG CGTACGTTCG CTGGGACGGC
AAGGCCGGCT ATCGCACGCG CGACTTCGAG GTGACGCTGG CGGCCGTCAA CCTGACCGAT
CGCGATTACT ACGCGAATGC GACGGGCCTC GCGCAGATCA TGCCCGGTAC GCCACGCACG
TTCACGCTGA CGGCGGCATA CAAGTTCTGA
 
Protein sequence
MNANDCRFQL HKIKFTQQHK PPRNGHVRQS LSHPQISMSK RQISGRRFPV LALSLCSIAG 
VASSPAPAAE FDDELPAVEV RSRRHPNDPR AESVSTATRT ASDPRDVPQT IDSVPVEETL
SYGGRTLADA LAGVPGVSNT SDTRFDSFRI RGFSAAGDLL LDGMRDDAQY VRSLSNIERV
EVLKGPAAAL YGRGSGGGVI NRITKQPLPE NFGHLSAATG SYGRLGASVD LNRMLSSAWS
VRLNAGREHA GSFRDHVDST RQYVAPSIKW HDARRSWLLQ FEYDAYRRVP DRGMPAPVAA
LDAAGKPFAF SLPSAPRATF FGAAGRDTIR DENMNWRSVF THALDGDWEL RHTLGVLNLR
STFDNTYVTQ SYVAKPRDYR HVQRARYLQD MTHLNVQTGV ELGGKVATGP ALHHLLFGIE
YGWQKRAPTL WQADAAPIPV TGPDRFALVG STPRPYAMNR HRVSDYAIFA QDRVDLGRAW
KLLGGLRGER FDVDSTNALN GLHARRTTAA WSPRLGVVWS PVGTHSLYAS YSKNFAPVGG
DLIGITPDAR GNANDLGPQY TRQYEIGVKS DWRDGALSTT LALFQLDLYN RRIADPVRPG
FFDLTGLERN RGLELGVAGR LAGDWFVRGG IGWQHARVVD AEPKYAGKRS AGVSASNGSL
FVGHAPLRGF FAELGLVYEG ARYADRDNLL ELPAYVRWDG KAGYRTRDFE VTLAAVNLTD
RDYYANATGL AQIMPGTPRT FTLTAAYKF