Gene Bcen_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1169 
Symbol 
ID4092608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1287298 
End bp1288461 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content67% 
IMG OID638014445 
Productpeptidase M20D, amidohydrolase 
Protein accessionYP_621049 
Protein GI107022722 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTACA GCGTGATTCC CGCCGGCCTC GCCGACGAAA TGATCGAGAT CCGGCACCGC 
ATCCATGCCC ACCCCGAGCT GGGTTTCGAG GAATTCGCGA CGAGCGACCT CGTCGCCGAG
CAGTTGCAGT CGTGGGGCTA CACCGTGCAT CGCGGGCTCG GCGGCACCGG CGTCGTCGCC
CAGTTGAAAG TGGGCGACGG CAAGCGGCGC CTCGGTCTGC GCGCCGACAT GGACGCGCTG
CCGATCCACG AAACGACGGG CCTGCCGTAC CAGAGCACGA TCGCGGGCAA GATGCACGCG
TGCGGCCACG ACGGCCACAC GGCGATGCTG CTCGCAGCCG CGAAGCACCT CGCGCGCGAA
CGCCGCTTCT CGGGCACGCT GAACCTGATC TTCCAGCCGG CCGAGGAAGG GCTCGGCGGC
GCCAAGAAGA TGCTCGACGA AGGGCTGTTC GAGCAATTTC CGTGTGACGC GATCTTCGCG
ATGCACAACA TGCCGGGCTT CCCGACCGGC AAATTCGGTT TCCTGCCGGG CTCGTTCATG
GCGTCGTCGG ATACCGTCGT CATCGACGTG CAGGGTCGCG GCGGCCACGG CGCGGTGCCG
CACCGGGCGA TCGATCCGGT CGTCGTATGC GCGCAGATCG TGCTGGCGCT GCAGACCATC
GTGTCGCGCA ACGTGTCGCC GCTCGACATG GCGATCATCA CGGTCGGTGC GATCCATGCG
GGCGAAGCGC CGAACGTGAT TCCCGATCGC GCGCAGATGC GCCTGTCGGT GCGCGCGCTG
AAGCCCGACG TGCGCGACTT GCTCGAAACG CGCATCAAGG AGGTCGTCCA TACGCAGGCG
GCCGTGTTCG GCGCGACCGC GACGATCGAC TACCAGCGCC GCTACCCAGT GCTCGTGAAC
GATGCGGAGA TGACGGCGTT CGCGCGCGGC GTGGCCCGTG AATGGGTCGG CGAAGCCAAT
CTGATCGACG GCATGGTGCC GCTCACCGGC AGCGAGGATT TCGCGTTCCT GCTCGAGAAA
CGGCCGGGCT GCTACCTGAT CATCGGCAAC GGCGACGGGG AGGGCGGCTG CATGGTGCAC
AACCCCGGCT ACGACTTCAA CGACGCGGCG CTGCCGACCG GCGCGTCGTA TTGGGTGAAG
TTAACTGAGG CGTTTCTGGT GTGA
 
Protein sequence
MTYSVIPAGL ADEMIEIRHR IHAHPELGFE EFATSDLVAE QLQSWGYTVH RGLGGTGVVA 
QLKVGDGKRR LGLRADMDAL PIHETTGLPY QSTIAGKMHA CGHDGHTAML LAAAKHLARE
RRFSGTLNLI FQPAEEGLGG AKKMLDEGLF EQFPCDAIFA MHNMPGFPTG KFGFLPGSFM
ASSDTVVIDV QGRGGHGAVP HRAIDPVVVC AQIVLALQTI VSRNVSPLDM AIITVGAIHA
GEAPNVIPDR AQMRLSVRAL KPDVRDLLET RIKEVVHTQA AVFGATATID YQRRYPVLVN
DAEMTAFARG VAREWVGEAN LIDGMVPLTG SEDFAFLLEK RPGCYLIIGN GDGEGGCMVH
NPGYDFNDAA LPTGASYWVK LTEAFLV