| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1148 |
|---|
| Symbol | |
|---|
| ID | 4093374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 1251852 |
|---|
| End bp | 1252598 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638014424 |
|---|
| Product | pili assembly chaperone |
|---|
| Protein accession | YP_621028 |
|---|
| Protein GI | 107022701 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.261386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCATT CCTTTTCCCT TTCCTTCCCG CGGCGCGCGC TGTGCGCGTT CGCGACCGTC
GGTGCGCTGC TTGCCGGCGC CGCCCATGCG GCGATCGTGC CCGATCGCAC GCGCGTGATC
TTCAACGAAG GCGAACAGGC CGCGATCGTG ACGATCACCA ACAAGAGCAC GACGTATCCG
TATCTCGTGC AGTCGTGGCT CGAAGATGCG AACGGCAACA AGATCACGTC GCCGCTGATG
GTCGTGCCGC CGCTGCAGCG GGTCGAGGCG AACGAGCGCA ACGTGCTGCG GATCGCGAAG
CTGCCCGGTA CGCAACTGCC GGCCGATCGC GAAACGGTGT TCTACCTGAA CATCCGCGAA
GTGCCGCCGA AGACGGATAC GCCGAACACG CTGCAGATCG CGCTGCACAC GCAGATGAAG
CTGTTCTACC GGCCGAAGGC CGTGCAGCCC GCGCGCGACG AGGACTGGAC GCTGCCGATG
ACGCTGCGGG TGGATGCGGC CGCGCACAAG CTGGTGTTCG ACAATCCGAC GCCTTACCAC
GTGACGGTGG TCGACGTGAG CGCGGGCGCG CAGAAGACGC CGGTGCCGAT CGAGCCGGTC
ATGGTGAGCC CGATGAGCAC GGCCGACGTG CCGTTCAAGG CCGCGACGCC GTCGACGCTG
TTCGTCACGC ACATCGACGA CTACGGCGGC CAGGTGGCGG TCGAGTATGC GTGCGAGGCC
GGTGCGTGCA AGAGCGTGAA GAAATGA
|
|---|
| Protein sequence | MKHSFSLSFP RRALCAFATV GALLAGAAHA AIVPDRTRVI FNEGEQAAIV TITNKSTTYP
YLVQSWLEDA NGNKITSPLM VVPPLQRVEA NERNVLRIAK LPGTQLPADR ETVFYLNIRE
VPPKTDTPNT LQIALHTQMK LFYRPKAVQP ARDEDWTLPM TLRVDAAAHK LVFDNPTPYH
VTVVDVSAGA QKTPVPIEPV MVSPMSTADV PFKAATPSTL FVTHIDDYGG QVAVEYACEA
GACKSVKK
|
|---|
| |