Gene Bcen_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1141 
Symbol 
ID4092360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp1241275 
End bp1241922 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID638014417 
ProductTetR family transcriptional regulator 
Protein accessionYP_621021 
Protein GI107022694 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.412477 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGCA AGACCCGGGA AGAATCGCTC GCCATCAAGC ACCGGATCCT CGACGCCGCC 
GAGCTCGCGC TGCTCGAAAG AGGCGTCGCG CAAACCGCGA TGGCGGACCT CGCCGAGGCC 
GCCGGGATGT CGCGGGGCGC CGTCTACGGC CACTACCGCA ACAAGATGGA AGTGTGTCTG 
GCGATGTGCG ACCGCGCGTT CGCGCGCACG TCGGAAGGGT TCGACGCGGG CGACGGCCTG 
CCGCCGTTCG CGACGCTGCG GCGTGCCGCG TCGCACTATC TGCAGGAATG CGGCGAGCCT 
GGCCCGATGC AGCGCGTGCT CGTGATTCTC TATACGAAGT GCGAGCAAAG CGAGGAGAAC 
GGCGCGCTGC AGCGGCGCCG CATGCTGCTC GAGCTGCAGA TGCTGCGGAT CACGAAGGCG 
CTGCTGCGTC GCGCGATCGC CGCCGGCGAA CTTGCCGTCG ATCTCGACGT GCACCTCGCC 
GCCGTCTATC TCGTGTCGCT GCTCGAAGGC GTGTTCGCGT CGATGATCTG GACCAACCGG 
TTGCGCGGCA ACCTGTGGAA CGACGCCGAG GCGATGCTCG ACGCCGGCTT CGACGCCGTG 
CGCACCTCCG CCGCTCTGCG CCGACGCGCG CAAAAATTGC CGGACTGA
 
Protein sequence
MARKTREESL AIKHRILDAA ELALLERGVA QTAMADLAEA AGMSRGAVYG HYRNKMEVCL 
AMCDRAFART SEGFDAGDGL PPFATLRRAA SHYLQECGEP GPMQRVLVIL YTKCEQSEEN 
GALQRRRMLL ELQMLRITKA LLRRAIAAGE LAVDLDVHLA AVYLVSLLEG VFASMIWTNR 
LRGNLWNDAE AMLDAGFDAV RTSAALRRRA QKLPD