| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1128 |
|---|
| Symbol | |
|---|
| ID | 4092347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 1224532 |
|---|
| End bp | 1225551 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638014404 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_621008 |
|---|
| Protein GI | 107022681 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00298191 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC CTCCCGTATC CCCGACCGAC GCAGGCGCGC AGCAGGACGT GACGGGGCGC
CGCGCGCGCA CGCTGTCCGG CACGCGGCTC GGCCTGTCGA ACTATCTCGG GCTGGCCGGC
GCGCTGGCCG CGATGATCGC GCTGTTCTCG GTGCTGAGCT CGCATTTCCT GACCTACGAC
ACGTTCAGCA CGATCGCGAA CCAGATTCCC GATCTCGTCG TGATGTCGGT CGGGATGACC
TTCGTGCTGA TCATCGCCGG GATCGACCTG TCGGTCGGCT CGGTGCTCGC GCTCGCCGCG
TCGATGGTCA GCGTCGCCGC GCTGAAATGG CAGTGGGGGC CGCTGCCGGC CGCGCTGATC
GGGATCGCGG TCGCGACCGC GACGGGCGCG CTGACGGGCG CGGTCACGGT GGGCTGGCGG
ATTCCGTCGT TCATCGTGTC GCTCGGCGTG CTGGAGGCCG CGCGCGGCCT CGCGTACCAG
CTGACGAATT CGCGCACCGC GTATATCGGC GACGCGTTCG ATTTCCTGTC GAACCCGATC
GCGCTGGGCA TTTCGCCGGC GTTCCTGATC GCGGTCGCGG TGATGATCGC GGCCCAGTTC
GTGCTCACGC GCACGGTGTT CGGGCGCTAT CTGGTCGGGA TCGGCACGAA CGAGGAAGCG
GTGCGGCTTG CCGGGGTTAA CCCGAGGCCG TATAAAATCC TCGTATTCGC GCTGATGGGC
GCGCTCGCGG GGCTCGCGTC GCTGTTCCAG ATTTCGCGGC TCGAGGCGGC CGATCCGAAC
GCGGGCGCGG GCCTCGAACT GCAGGTGATC GCCGCCGTCG TGATCGGCGG CACGAGCCTG
ATGGGCGGGC GCGGCTCGGT GATCAGCACG TTCTTCGGCG TGTTGATCAT CTCCGTGCTG
GCCGCGGGGC TGGCGCAGAT CGGGGCGAAC GAGCCGACGA AGCGGATCAT CACGGGTGCG
GTGATCGTGG TGGCGGTCGT GCTCGATACG TATCGCAGCC GGCGTACGCG CGTGCGGTAA
|
|---|
| Protein sequence | MTQPPVSPTD AGAQQDVTGR RARTLSGTRL GLSNYLGLAG ALAAMIALFS VLSSHFLTYD
TFSTIANQIP DLVVMSVGMT FVLIIAGIDL SVGSVLALAA SMVSVAALKW QWGPLPAALI
GIAVATATGA LTGAVTVGWR IPSFIVSLGV LEAARGLAYQ LTNSRTAYIG DAFDFLSNPI
ALGISPAFLI AVAVMIAAQF VLTRTVFGRY LVGIGTNEEA VRLAGVNPRP YKILVFALMG
ALAGLASLFQ ISRLEAADPN AGAGLELQVI AAVVIGGTSL MGGRGSVIST FFGVLIISVL
AAGLAQIGAN EPTKRIITGA VIVVAVVLDT YRSRRTRVR
|
|---|
| |