Gene Bcen_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1120 
Symbol 
ID4093780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1215098 
End bp1215745 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID638014396 
ProductLexA repressor 
Protein accessionYP_621000 
Protein GI107022673 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC TCACCGCCCG TCAGCAGCAA GTGTTCGACT TGATCCGTCG CGCGATCGAG 
CGCTCCGGAT TCCCGCCCAC CCGTGCCGAG ATCGCGGCCG AACTGGGCTT CAGCTCGCCG
AATGCGGCCG AGGAGCACCT GCGCGCGCTG GCTCGCAAGG GCGTGATCGA GCTGGCCGCC
GGCGCATCGC GCGGCATCCG GCTGCTCGGC ATCGACGACG CCCCGCACCA GTTCACGCTG
CCGCATGCCG GCCTGATGCA ACTGTCGCTG CCGCTCGTCG GCCGCGTCGC GGCCGGTAGC
CCGATCCTTG CGCAGGAGCA CATCTCGCAG CACTACGCGT GCGATCCCGC GCTGTTCACC
AGCAAGCCCG ACTATCTGTT GAAGGTGCGC GGCCTGTCGA TGCGCGACGC CGGCATTCTC
GACGGCGACC TCCTCGCCGT GCAGAAGCGC ACGGAAGCGA AGGACGGCCA GATCATCGTC
GCGCGTCTCG GCGACGACGT CACGGTCAAG CGGCTGATGC GCCGGCCCGG CGGCCTCGAG
CTGATCGCGG AGAACCCGGA TTACGAAAAC ATCTTCGTCA AGGCCGGCAG CGCGGATTTC
GCGCTGGAAG GCATCGCCGT CGGGCTGATC CGCTCGGGCG AACTCTGA
 
Protein sequence
MTKLTARQQQ VFDLIRRAIE RSGFPPTRAE IAAELGFSSP NAAEEHLRAL ARKGVIELAA 
GASRGIRLLG IDDAPHQFTL PHAGLMQLSL PLVGRVAAGS PILAQEHISQ HYACDPALFT
SKPDYLLKVR GLSMRDAGIL DGDLLAVQKR TEAKDGQIIV ARLGDDVTVK RLMRRPGGLE
LIAENPDYEN IFVKAGSADF ALEGIAVGLI RSGEL