| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1080 |
|---|
| Symbol | |
|---|
| ID | 4093172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 1180311 |
|---|
| End bp | 1181474 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638014355 |
|---|
| Product | 3-hydroxyisobutyryl-CoA hydrolase |
|---|
| Protein accession | YP_620960 |
|---|
| Protein GI | 107022633 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCA TGACCGATTC CCTTTCCGCC GCCGTTTCCG CCGAATCCGC CCAGCCCGAC
GTGCGCGCCT ATGTCGCGAA CCGCATCGGC TTTCTCGAAC TGAACCGGCC GAAGGCGCTG
AATGCGCTGT CGATCGGCAT GATCCGGCTG ATGCAGCAGG CGCTCGACGC GTGGCGCGAC
GATCCCGACG TCGTCGCGGT CGTGGTGCAC AGTCCCCACC CGCGCGCGTT CTGCGCGGGC
GGCGACGTGC GCTTCTTCCA CGATGCGTGG CAGCGCGGCG ACCGCGATGC GGTCGATACG
TTCTTCATCG AGGAATACAC GCTGAACCAT GCGATTTTCA CGTATCCGAA GCCGTACATC
GCGTTGATGC ACGGCGTCGT GATGGGCGGC GGCATGGGGA TTTCGCAGGC GGCGCGGCAT
ACGGGCGGCC TGCGCGTCGT GACCGACTCG ACGAAGATGG CGATGCCCGA AACGCGCATC
GGCCTGTTCC CGGACGTCGG GATGAGCTGG TTTCTCGCGC GCACGCCCGG CGCGATCGGC
CGCTATCTCG CGGTGACCGG CGCGACGCTC GACGCGGCCG GCGCGCTGTA CGCGCAACTC
GCCGACGTCT ATCTGCCCGA TGCCGCGCTG CCGCCGCTGC TCGACACGCT GCGCGGCACG
CGCATCGACA GCGGTGCGCA GGCCGTCGGG TGCGTGACCG ACGCGGCGGC CGCGCACAAG
GTCGTGCCGA CGCCGGACAC GTCGGCGCTC GCCGACGCGC GCGCCGGGAT CGACCGGCAT
TTCGCGCAGC CCGACCTCAA CGCAATCCTC GCGTCGCTCG ACGCCGAGCC GGATTGCGCG
GCGGTCGACG GGTGGGTCGA GAAGGCGACT CACGCGATGC GCGAGCAGTT GTCGCCGCTG
TCGATGGCCG TATCGCTCGA AGTCGTCGAA CGCGCGCGCG GCGCGACGAT GGCCGATTGC
CTGCGGCGCG ATCTCGATCT CACGCGCTCG ACCTTCGCGC GCGGCGACGT GATCGAAGGC
GTGCGCGCGC TGATCGTCGA CAAGGATCAC CAGCCGGTGT GGCGCTTCAG GTCGGCCGCC
GACGTCGGGC GCGCCGACGT GCTCGCGATG TTCGACAGCC CGTGGACGCC CGACACGCAT
CCGCTGCGCG CGCTGAAGGA CTGA
|
|---|
| Protein sequence | MTFMTDSLSA AVSAESAQPD VRAYVANRIG FLELNRPKAL NALSIGMIRL MQQALDAWRD
DPDVVAVVVH SPHPRAFCAG GDVRFFHDAW QRGDRDAVDT FFIEEYTLNH AIFTYPKPYI
ALMHGVVMGG GMGISQAARH TGGLRVVTDS TKMAMPETRI GLFPDVGMSW FLARTPGAIG
RYLAVTGATL DAAGALYAQL ADVYLPDAAL PPLLDTLRGT RIDSGAQAVG CVTDAAAAHK
VVPTPDTSAL ADARAGIDRH FAQPDLNAIL ASLDAEPDCA AVDGWVEKAT HAMREQLSPL
SMAVSLEVVE RARGATMADC LRRDLDLTRS TFARGDVIEG VRALIVDKDH QPVWRFRSAA
DVGRADVLAM FDSPWTPDTH PLRALKD
|
|---|
| |