| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1063 |
|---|
| Symbol | |
|---|
| ID | 4092164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 1161346 |
|---|
| End bp | 1162899 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638014334 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_620943 |
|---|
| Protein GI | 107022616 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.627623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGTT CTGAGTCGCC CCGCCCGCTG CTCGAGATGC GCGGGATCAG CAAGACGTTC
CCGGCCGTAC GCGCACTCGA CAACGTCAGC CTGACCGTCT ATCCGGGCGA GATCCATTCG
CTGATGGGCG AGAACGGCGC GGGCAAATCG ACGCTGATGA AGATCCTGTC GGGCGCCTAC
CGCGCCGACG CCGGCGGCGA GATCCTGATC GACGGCCAAC GCATCGAGAT CGACGGCCCG
CTCGCCGCAC GCGATGCCGG CGTCGCGGTG ATCTACCAGG AGCTGTGCCT GTCGCCGAAC
CTGACCGTCG CGGAAAACAT CTACGTCGGC CGCGAACTGC GCCGCGGCAA CCGGCGCTGG
GGCACGATCG ACCGCGCGGC GATGGCGCGC GGCTGCCAGG ACGTGCTCGC GCGCCTGGGT
GCCCCGTTCG GGCCCGACAC GCTCGTCGAC ACGCTGTCGA TCGCCGAACA GCAGCTCGTC
GAAATCGCGC GCGCCGTGCA TACCCGCGCC CGCATCCTCG TGATGGACGA GCCGACCACG
CCGCTGTCGT CGCGCGAAAC CGAACACCTG TTCCGCCTGA TCCGCCAGTT GCGCGAGGAA
GGCCTCGCGA TCATCTACAT CAGCCACCGG ATGGCGGAGA TCTACGAGCT GTCCGACCGC
GTGTCGGTGC TGCGCGACGG CGCGTACGTC GGCACGCTGG AGCGCGCGTC GCTGTCGGCC
GAGCGGCTCG TCGCGATGAT GGTCGGTCGC GACATCTCCG GTTTCTACAA GAAGGAACAC
GCGCCGTACG ACCCCGGCCA CCTGCTGCTG TCAGTCCGCG ACATCGCCGA CGGCACGCGC
GTGCGCGGCT GCAGCCTCGA CCTGCATGCC GGCGAAGTGC TCGGCATCGC GGGGCTCGTC
GGCGCGGGCC GCACCGAGCT CGCACGGCTG ATCTTCGGCG CCGAGCCGCG CGTGCGCGGC
GACGTGAAGC TCGGCGAGCG CACGTTCGGC GCGCACTCGC CGCGCGACGC GATCGACGCG
GGCCTCGTCT ACCTGACCGA AGACCGCAAG CGCCAGGGCC TGTTCCTCGA CATGAGCGTG
CGCGACAACA TCAACATCTC GGTGTGCAAC CGCGATGCGC GGCTCGGTGC GCTCGACCTC
GCGCGCGGCG CCGAACGGGC GCGCGACGCC ATCGCGTCAC TGTCGATCCG GGTGCCGCAC
GCGAACGTCA ACGTCGGCGC GCTGTCCGGC GGCAACCAGC AGAAAGTGCT GCTGTCGCGC
CTGCTCGAGA CGAAGCCGCG CGTGCTGATC CTCGACGAAC CGACACGCGG CGTCGACATC
GGCGCGAAAT CCGAGATCTA CCGGATCATC AACGAACTGG CCCGTGCCGG CGTGGGCGTA
ATCGTGATCT CGAGCGAACT GCCGGAAATC ATCGGCGTCG CCGACCGCGT GCTCGTGATG
CGCGAAGGCG AGATCGCAGG CGAACTCGGC GGACACACGC ATACGCCGAT CACGCAGGAA
GCGATCATCG CGCTCGCCAC CGGCTCGCAG GCCGAACTGG CCGACGCGCA CTGA
|
|---|
| Protein sequence | MSRSESPRPL LEMRGISKTF PAVRALDNVS LTVYPGEIHS LMGENGAGKS TLMKILSGAY
RADAGGEILI DGQRIEIDGP LAARDAGVAV IYQELCLSPN LTVAENIYVG RELRRGNRRW
GTIDRAAMAR GCQDVLARLG APFGPDTLVD TLSIAEQQLV EIARAVHTRA RILVMDEPTT
PLSSRETEHL FRLIRQLREE GLAIIYISHR MAEIYELSDR VSVLRDGAYV GTLERASLSA
ERLVAMMVGR DISGFYKKEH APYDPGHLLL SVRDIADGTR VRGCSLDLHA GEVLGIAGLV
GAGRTELARL IFGAEPRVRG DVKLGERTFG AHSPRDAIDA GLVYLTEDRK RQGLFLDMSV
RDNINISVCN RDARLGALDL ARGAERARDA IASLSIRVPH ANVNVGALSG GNQQKVLLSR
LLETKPRVLI LDEPTRGVDI GAKSEIYRII NELARAGVGV IVISSELPEI IGVADRVLVM
REGEIAGELG GHTHTPITQE AIIALATGSQ AELADAH
|
|---|
| |