Gene Bcen_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1038 
Symbol 
ID4092268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp1135291 
End bp1135785 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content62% 
IMG OID638014309 
Productpeptidase A24A, prepilin type IV 
Protein accessionYP_620918 
Protein GI107022591 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4960] Flp pilus assembly protein, protease CpaA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000360772 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTGC TAACTGGCGT CGGGGTTTTC CTCGCGTGGG CGGTGCTCGT CGCGCTCGAG 
GACATCCGTC ATAGGCGTAT ACCGAATTCA CTGGTGATCG GTGGATTCGT ATCTGCATTT 
GTGCTCGCCG GGCATAGTCC ATTCGGCATA TCCGTGAATC AGGCGCTCAT TGGCGTACTG 
ATCGGCTTTC TCAGCCTTTT CCCGTTTTTT GTGCTGCGCG TAATGGGTGC CGCGGATGTC 
AAGGTATTCG CGGTGCTGGG CGCGTGGTGC GGCCCGCATG CGCTGCTGTG GCTCTGGATC 
ATTGCGAGCC TGCTGGCATT CGCGCATGCC GGCACGCTGG TTTTCGCCAC CCGTACGCCG 
GTGTCGGCAT TGTGGCAGCG GCGTTCGCCG ACGATGCAGA TCGCCGGTTT CCGGGCGTCG 
CCGTATGCCG CGTTTCTCGT GATTCCCGCG GCGCTGTGGT GCCTGTACCG GATCGCGACG 
GGGGGAATGC AATGA
 
Protein sequence
MILLTGVGVF LAWAVLVALE DIRHRRIPNS LVIGGFVSAF VLAGHSPFGI SVNQALIGVL 
IGFLSLFPFF VLRVMGAADV KVFAVLGAWC GPHALLWLWI IASLLAFAHA GTLVFATRTP 
VSALWQRRSP TMQIAGFRAS PYAAFLVIPA ALWCLYRIAT GGMQ