Gene Bcen_1027 details

Gene Information

• Locus tag: Bcen_1027
• ID: 4092257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: +
• Start bp: 1118943
• End bp: 1120769
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638014298
• Product: GTP-binding protein TypA
• Protein accession: YP_620907
• Protein GI: 107022580
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCGCG CCCTTCGCAA TATCGCCATC ATCGCCCACG TCGACCACGG CAAGACCACG 
CTCGTCGACC AACTGCTCCG CCAGTCCGGC ACCTTCCGCG ACAACCAGCA GATTGCGGAG 
CGGGTGATGG ATTCGAACGA CATCGAAAAA GAGCGCGGGA TCACGATTCT CGCGAAGAAC 
TGCGCGGTCG AATACGAAGG CACGCACGTC AACATCGTCG ACACCCCGGG GCACGCGGAC 
TTCGGCGGCG AAGTCGAGCG CGTGCTGTCG ATGGTCGACT CGGTGCTGCT GCTCGTCGAC 
GCGGTCGAGG GCCCGATGCC GCAGACGCGC TTCGTCACGA AGAAGGCGCT CGCGCTCGGC 
CTGAAGCCGA TCGTCGTCGT CAACAAGATC GACCGCCCGG GCGCGCGGAT CGACTGGGTG 
ATCAACCAGA CCTTCGACCT GTTCGACAAG CTCGGCGCGA CCGAAGAGCA GCTCGACTTC 
CCGATCGTCT ACGCGTCGGG CCTGAACGGC TACGCGTCGC TCGACCCGGC CGCGCGTGAA 
GGCGACATGC GTCCGCTGTT CGAGGCGATC CTCGAGCACG TGCCGGTTCG CCCGGCCGAT 
CCGGAAGCGC CGCTGCAGCT CCAGATCACG TCGCTCGACT ATTCGACGTA CGTCGGCCGG 
ATCGGCGTCG GCCGCATCAC GCGCGGCCGC ATCAAGCCGG GCCAGCCGGT CGTGATGCGC 
TTTGGCCCGG AAGGCGACGT GCTGAACCGC AAGATCAACC AGGTGCTGTC GTTCAAGGGT 
CTGGAGCGCG TGCAGGTCGA ATCGGCGGAA GCGGGCGACA TCGTGCTGAT CAACGGTATT 
GAAGACGTCG GCATCGGCGC GACGATCTGC GCGGTCGACA CGCCGGAAGC GCTGCCGATG 
ATCACCGTCG ACGAACCGAC GCTGACGATG AACTTCCTCG TCAACTCGTC GCCGCTCGCC 
GGCCGCGAAG GCAAGTTCGT GACGAGCCGC CAGATCCGCG ACCGTCTGAT GAAGGAACTG 
AACCACAACG TCGCGCTGCG CGTGAAGGAT ACCGGCGACG AAACCGTGTT CGAAGTGTCG 
GGCCGCGGCG AACTGCACCT GACGATTCTC GTCGAGAACA TGCGTCGCGA AGGCTACGAG 
CTCGCCGTGT CGCGTCCGCG CGTGGTGATG CAGGAAATCG ACGGCGTGCG TCACGAGCCG 
TACGAGCTGC TGACGGTCGA CGTCGAGGAC GAACACCAGG GCGGCGTGAT GGAAGAGCTC 
GGCCGCCGCA AGGGCGAAAT GCTCGACATG GCGTCGGACG GCCGCGGCCG CACGCGCCTG 
GAGTACAAGA TCTCGGCACG TGGCCTGATC GGCTTCCAGA GCGAATTCCT GACGCTCACG 
CGCGGCACGG GCCTGATGAG CCACATCTTC GACTCGTACG CACCGGTCAA GGACGGCTCG 
GTCTTCGAGC GCCGCAACGG CGTGCTGATC TCGCAGGACG ACGGCGCGGC GGTTGCCTAC 
GCCCTGTGGA AGCTGCAGGA TCGCGGCCGC ATGTTCGTGA AGCCGGGCGA CGCGCTGTAT 
GAGGGCATGA TCATCGGCAT CCACAGCCGC GACAACGACC TCGTCGTGAA CCCGATCAAG 
GGCAAGCAGC TGACCAACGT GCGCGCGTCG GGCACCGACG AAGCCGTGCG TCTCGTGCCG 
CCGGTCCAGA TGTCGCTGGA ATACGCGGTG GAATTCATCG ACGACGACGA GCTCGTCGAA 
GTGACGCCGC AGTCGATCCG TCTGCGCAAG CGCTTCCTGA AGGAGCACGA GCGTCGCCGC 
GCGAGCCGCG AAGGCGCGGT CGACTAA 

 

Protein sequence

MTRALRNIAI IAHVDHGKTT LVDQLLRQSG TFRDNQQIAE RVMDSNDIEK ERGITILAKN 
CAVEYEGTHV NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVEGPMPQTR FVTKKALALG 
LKPIVVVNKI DRPGARIDWV INQTFDLFDK LGATEEQLDF PIVYASGLNG YASLDPAARE 
GDMRPLFEAI LEHVPVRPAD PEAPLQLQIT SLDYSTYVGR IGVGRITRGR IKPGQPVVMR 
FGPEGDVLNR KINQVLSFKG LERVQVESAE AGDIVLINGI EDVGIGATIC AVDTPEALPM 
ITVDEPTLTM NFLVNSSPLA GREGKFVTSR QIRDRLMKEL NHNVALRVKD TGDETVFEVS 
GRGELHLTIL VENMRREGYE LAVSRPRVVM QEIDGVRHEP YELLTVDVED EHQGGVMEEL 
GRRKGEMLDM ASDGRGRTRL EYKISARGLI GFQSEFLTLT RGTGLMSHIF DSYAPVKDGS 
VFERRNGVLI SQDDGAAVAY ALWKLQDRGR MFVKPGDALY EGMIIGIHSR DNDLVVNPIK 
GKQLTNVRAS GTDEAVRLVP PVQMSLEYAV EFIDDDELVE VTPQSIRLRK RFLKEHERRR 
ASREGAVD