| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1024 |
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| Symbol | |
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| ID | 4092254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 1115269 |
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| End bp | 1116483 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638014296 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_620905 |
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| Protein GI | 107022578 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACC AACAAAACGC CGCCAGCGCG CAGCCGCAGA ACAACGGCAA GCGCAAACGA
ATGATGACGC TGCTCGTCGC GGTCATCGTG ATCGCGGCCA TCGCATACGG CCTGTACTAC
TTCCTCGTCG CCCGCTTCCA TGAAGACACC GACGATGCCT ACGTGAACGG CAACGTCGTG
CAGATCACGC CGCAGGTCAC CGGCACCGTG ATCGCCGTGA AGGCGGACGA CACGCAAACG
GTCAAGGCCG GCGATCCGCT CGTCGTGCTC GACCCCGCCG ATTCGCAGGT CGCGCTGCAG
CAGGCGGAAG CCAACCTCGC GCAGACGGTG CGCCAGGTGC GTGGCCTGTT CGTCAACGAC
GACCAGTACC GCGCGCAAGT CGCGCTGCGC CAGTCCGACC TGTCGAAGGC CCAGGACGAT
CTGCGCCGCC GCCTGGCCGT CGCGCAGACG GGCGCCGTGT CGCAGGAAGA AATCTCGCAC
GCCCGCGACG CGGTGAAGGC CGCGCAGGCA TCGGTCGACG CCGCGCAGCA ACAGCTCGCA
TCGAATCGCG CATTGACCGC GAACACGACG ATCGCATCGC ACCCGAACGT GATGGCCGCC
GCCGCGAAGG TGCGCGACGC GTACCTCGCG AACGCGCGTA ACGTGCTGCC GGCGCCGGTC
ACCGGCTACG TCGCGAAGCG CTCGGTGCAG GTCGGCCAGC GCGTGTCGCC CGGCAACCCG
CTGATGTCGG TGGTGCCGCT CAATGCCGTG TGGGTCGACG CGAACTTCAA GGAAGTCCAG
CTGAAGCACA TGCGCATCGG CCAGCCGGTC GAGCTGACGG CCGACATCTA TGGTTCGTCG
GTCACGTACC ACGGCAAGGT CGTCGGCTTC TCGGCCGGCA CGGGCTCGGC GTTCTCGCTG
CTGCCGGCGC AGAATGCGAC CGGCAACTGG ATCAAGGTCG TGCAGCGCCT GCCGGTGCGG
ATCGAGCTCG ATCCGAAGGA TCTCGACAAG CATCCGCTGC GTATCGGCCT GTCGATGCAG
GTCGACGTGG ACATCAAGGA CGAACGCGGC GACCAGCTCG TCAACGCGCC GAACACCGTC
TACGAGACCA ACGTGTTCGC GAAATACGGC GACGAGGCCG ACGCCGAAAT CGCGCGCATC
ATCGCCGAGA ACGCGGGCGG CAACGCATCG GCGCCGGTCG CGGCGAAGCA GAACACCGCC
GCGAAAATGA TGTAA
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| Protein sequence | MSDQQNAASA QPQNNGKRKR MMTLLVAVIV IAAIAYGLYY FLVARFHEDT DDAYVNGNVV
QITPQVTGTV IAVKADDTQT VKAGDPLVVL DPADSQVALQ QAEANLAQTV RQVRGLFVND
DQYRAQVALR QSDLSKAQDD LRRRLAVAQT GAVSQEEISH ARDAVKAAQA SVDAAQQQLA
SNRALTANTT IASHPNVMAA AAKVRDAYLA NARNVLPAPV TGYVAKRSVQ VGQRVSPGNP
LMSVVPLNAV WVDANFKEVQ LKHMRIGQPV ELTADIYGSS VTYHGKVVGF SAGTGSAFSL
LPAQNATGNW IKVVQRLPVR IELDPKDLDK HPLRIGLSMQ VDVDIKDERG DQLVNAPNTV
YETNVFAKYG DEADAEIARI IAENAGGNAS APVAAKQNTA AKMM
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