Gene Bcen_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1019 
SymbolnusA 
ID4093313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1107643 
End bp1109118 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content63% 
IMG OID638014291 
Producttranscription elongation factor NusA 
Protein accessionYP_620900 
Protein GI107022573 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.974468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGCG AAGTGTTGAT GCTGGTGGAT GCGCTGGCGC GCGAGAAAAA CGTCGACAAG 
GATGTGGTGC TGGGCGCCCT CGAGGCTGCG CTCGCGTCCG CTTCCAAGAA GCTGTTCGAC
GAAGGCGCCG AAATCCGCGT CCATATCGAT CGCGAAAGCG GCGAGCACGA AACCTTCCGT
CGCTGGCTCG TCGTGCCCGA CGAGGCAGGC TTGCAGGAGC CGGATCGCGA GATCCTGCTG
TTCGAAGCGC GTGAGCAGAA GCCCGACGTC GAAGTCGGCG AGTATGTCGA GGAACCCGTT
CCGTCGATCG AATTCGGTCG CATCGGCGCG CAGGCCGCGA AGCAGGTGAT CCTGCAGAAG
GTGCGCGACG CGGAGCGCGA GCAGATCCTG AACGACTACC TCGAGCGTGG CGAAAAGATC
ATGACGGGTA CGGTGAAGCG CCTCGACAAG GGCAACTTCA TCGTCGAATC GGGCCGCGTC
GAGGCGCTGC TGCGCCGCGA TCAGCTGATC CCGAAGGAAA ACCTGCGCGT GGGCGACCGC
GTGCGTGCGT ACATCGCGAA GGTCGACCGC ACCGCGCGCG GCCCGCAGAT CGAGCTGTCG
CGCACGGCGC CGGAATTCCT GATGAAGCTG TTCGAGATGG AGGTGCCGGA AATCGAGCAG
GGCCTGCTCG AGATCAAGGC GGCTGCCCGC GACCCGGGCG TGCGCGCGAA GATCGGCGTC
ATCGCCTACG ACAAGCGGAT CGATCCGATC GGCACCTGCG TCGGCATCCG CGGTTCCCGC
GTGCAGGCCG TGCGCAACGA GCTCGGTGGC GAAAACATCG ACATCGTGCT ATGGTCGGAG
GATCCCGCCC AGTTCGTGAT CGGCGCGCTC GCGCCGGCAG CCGTCCAGTC GATCGTCGTC
GATGAGGAAA AGCATTCGAT GGACGTCGTC GTCGACGAGA ACGAGCTGGC TGTCGCGATC
GGCCGCAGCG GTCAGAACGT TCGCCTTGCC GGCGAGCTGA CCGGCTGGCA GATCAACATC
ATGACGCCGG ACGAGTCCGC CCTGAAGCAG GGTGAAGAAC GCGACCGGCT GCGTGCGCTG
TTCATGGCGC GTCTCGACGT CGACGAAGAA GTTGCCGACA TCCTGATCGA CGAAGGCTTC
ACGAGCCTCG AAGAAATCGC GTACGTGCCG CTCAACGAAA TGCTCGAAAT CGAAGCGTTC
GACGAGGACA CCGTGCACGA ACTGCGCAAC CGCGCACGCG ACGCGCTGTT GACGATGGCC
ATCGCGAACG AAGAAAAGGT TGAGAACGCG GCGCTGGATC TCAAGAGCCT CGACGGCATC
ACGCCGGAGC TGCTCGCGAA GCTGGCCGAA CACGGCGTGC AGACGCGCGA CGATCTCGCC
GAGCTGGCTG TAGATGAACT GGTCGACATG ACCGGAATGG AAGAGGATGC CGCTAAGGCG
TTGATCATGA AAGCACGTGA ACATTGGTTC CAGTGA
 
Protein sequence
MSREVLMLVD ALAREKNVDK DVVLGALEAA LASASKKLFD EGAEIRVHID RESGEHETFR 
RWLVVPDEAG LQEPDREILL FEAREQKPDV EVGEYVEEPV PSIEFGRIGA QAAKQVILQK
VRDAEREQIL NDYLERGEKI MTGTVKRLDK GNFIVESGRV EALLRRDQLI PKENLRVGDR
VRAYIAKVDR TARGPQIELS RTAPEFLMKL FEMEVPEIEQ GLLEIKAAAR DPGVRAKIGV
IAYDKRIDPI GTCVGIRGSR VQAVRNELGG ENIDIVLWSE DPAQFVIGAL APAAVQSIVV
DEEKHSMDVV VDENELAVAI GRSGQNVRLA GELTGWQINI MTPDESALKQ GEERDRLRAL
FMARLDVDEE VADILIDEGF TSLEEIAYVP LNEMLEIEAF DEDTVHELRN RARDALLTMA
IANEEKVENA ALDLKSLDGI TPELLAKLAE HGVQTRDDLA ELAVDELVDM TGMEEDAAKA
LIMKAREHWF Q