Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_1019 |
Symbol | nusA |
ID | 4093313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1107643 |
End bp | 1109118 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638014291 |
Product | transcription elongation factor NusA |
Protein accession | YP_620900 |
Protein GI | 107022573 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.974468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGCG AAGTGTTGAT GCTGGTGGAT GCGCTGGCGC GCGAGAAAAA CGTCGACAAG GATGTGGTGC TGGGCGCCCT CGAGGCTGCG CTCGCGTCCG CTTCCAAGAA GCTGTTCGAC GAAGGCGCCG AAATCCGCGT CCATATCGAT CGCGAAAGCG GCGAGCACGA AACCTTCCGT CGCTGGCTCG TCGTGCCCGA CGAGGCAGGC TTGCAGGAGC CGGATCGCGA GATCCTGCTG TTCGAAGCGC GTGAGCAGAA GCCCGACGTC GAAGTCGGCG AGTATGTCGA GGAACCCGTT CCGTCGATCG AATTCGGTCG CATCGGCGCG CAGGCCGCGA AGCAGGTGAT CCTGCAGAAG GTGCGCGACG CGGAGCGCGA GCAGATCCTG AACGACTACC TCGAGCGTGG CGAAAAGATC ATGACGGGTA CGGTGAAGCG CCTCGACAAG GGCAACTTCA TCGTCGAATC GGGCCGCGTC GAGGCGCTGC TGCGCCGCGA TCAGCTGATC CCGAAGGAAA ACCTGCGCGT GGGCGACCGC GTGCGTGCGT ACATCGCGAA GGTCGACCGC ACCGCGCGCG GCCCGCAGAT CGAGCTGTCG CGCACGGCGC CGGAATTCCT GATGAAGCTG TTCGAGATGG AGGTGCCGGA AATCGAGCAG GGCCTGCTCG AGATCAAGGC GGCTGCCCGC GACCCGGGCG TGCGCGCGAA GATCGGCGTC ATCGCCTACG ACAAGCGGAT CGATCCGATC GGCACCTGCG TCGGCATCCG CGGTTCCCGC GTGCAGGCCG TGCGCAACGA GCTCGGTGGC GAAAACATCG ACATCGTGCT ATGGTCGGAG GATCCCGCCC AGTTCGTGAT CGGCGCGCTC GCGCCGGCAG CCGTCCAGTC GATCGTCGTC GATGAGGAAA AGCATTCGAT GGACGTCGTC GTCGACGAGA ACGAGCTGGC TGTCGCGATC GGCCGCAGCG GTCAGAACGT TCGCCTTGCC GGCGAGCTGA CCGGCTGGCA GATCAACATC ATGACGCCGG ACGAGTCCGC CCTGAAGCAG GGTGAAGAAC GCGACCGGCT GCGTGCGCTG TTCATGGCGC GTCTCGACGT CGACGAAGAA GTTGCCGACA TCCTGATCGA CGAAGGCTTC ACGAGCCTCG AAGAAATCGC GTACGTGCCG CTCAACGAAA TGCTCGAAAT CGAAGCGTTC GACGAGGACA CCGTGCACGA ACTGCGCAAC CGCGCACGCG ACGCGCTGTT GACGATGGCC ATCGCGAACG AAGAAAAGGT TGAGAACGCG GCGCTGGATC TCAAGAGCCT CGACGGCATC ACGCCGGAGC TGCTCGCGAA GCTGGCCGAA CACGGCGTGC AGACGCGCGA CGATCTCGCC GAGCTGGCTG TAGATGAACT GGTCGACATG ACCGGAATGG AAGAGGATGC CGCTAAGGCG TTGATCATGA AAGCACGTGA ACATTGGTTC CAGTGA
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Protein sequence | MSREVLMLVD ALAREKNVDK DVVLGALEAA LASASKKLFD EGAEIRVHID RESGEHETFR RWLVVPDEAG LQEPDREILL FEAREQKPDV EVGEYVEEPV PSIEFGRIGA QAAKQVILQK VRDAEREQIL NDYLERGEKI MTGTVKRLDK GNFIVESGRV EALLRRDQLI PKENLRVGDR VRAYIAKVDR TARGPQIELS RTAPEFLMKL FEMEVPEIEQ GLLEIKAAAR DPGVRAKIGV IAYDKRIDPI GTCVGIRGSR VQAVRNELGG ENIDIVLWSE DPAQFVIGAL APAAVQSIVV DEEKHSMDVV VDENELAVAI GRSGQNVRLA GELTGWQINI MTPDESALKQ GEERDRLRAL FMARLDVDEE VADILIDEGF TSLEEIAYVP LNEMLEIEAF DEDTVHELRN RARDALLTMA IANEEKVENA ALDLKSLDGI TPELLAKLAE HGVQTRDDLA ELAVDELVDM TGMEEDAAKA LIMKAREHWF Q
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