| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_1016 |
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| Symbol | |
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| ID | 4093310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | + |
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| Start bp | 1104976 |
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| End bp | 1106736 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638014288 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_620897 |
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| Protein GI | 107022570 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.718536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAGATA TCCACGATAT TGAATCGTCC GCGCCTGCCG TGCAGGCAGC GCGTGCAGAC
GATGCGCCGG AGCAGGATGC TTCGGCCGCG GGTGGCGACG AGCGTCCCCG CCGCGGTCTG
CGGCGCGGCC CGCGTAGCCT GATCGCGCGG CGTCGCGCGG CGGCCAAGTC GAAGGGCGCC
GAAGGCGAGC AGCAGGGTGC CGAGGGCGCG GATGCGCAGC CGGCCGAGGC TGCCGACGCG
CAGCCGGTGC GTGCGCCGCG CAAGGAAGGC GCGGCCAAGG GCGGTCGCAA GCCGGCCGGC
AAGCGCGAAG GCGCGGCGGC GGCCAAGGGC GGCCAGGCTG GCCAGGGCCG TCGCGGTGCA
GCGAAGGCTG AAGGCGGCCC GGCGAAGGCG GCGGAAGGCG ATGCGTCCCA GGACGAACTG
TTCGCATACG TGACGTCGCC GGCCTTCGAC GCGGACAACT CCGCGGGCGG CAGCGGCGTG
CGTGCGCCGA TGCTGCGCCG CGGCCGCGCC CAGCCGGCCA ACAAGCGCGT GCTGTCGCCG
GACGACGACG CGCCGAAGCT CCACAAGGTG CTGGCGGAAG CGGGCATGGG GTCGCGCCGC
GAAATGGAAG AGCTGATCGT CGCCGGCCGC GTGTCGGTGA ACGGCGAACC CGCGCACATC
GGCCAGCGGA TCATGCCGAC CGACCAGGTG CGGATCAACG GCAAGCCGGT CAAGCGCAAG
CTGCCGAACA AGCCGCCGCG CGTGCTGCTG TATCACAAGC CGACCGGCGA AATCGTCAGC
CACGCGGATC CGGAAGGCCG TCCGTCGGTG TTCGACCGTC TGCCGCCGAT GAAGACGGCG
AAATGGCTTG CGGTGGGCCG CCTCGACTTC AATACCGAAG GTCTGCTGAT GCTGACGACT
TCCGGCGATC TCGCGAACCG CTTCATGCAT CCGCGTTACA GCGTCGAGCG CGAGTACGCG
GTGCGCGTCG TCGGCGAGCT GGCCGAAGGC ATGCGGCAAA AGCTGCTGCA CGGCGTCGAG
CTCGACGACG GTCCGGCGAA TTTCCTGCGC ATCCGCGATG GCGGCGGCGA AGGCACGAAC
CACTGGTATC ACGTCGCGCT GGCCGAAGGC CGCAACCGAG AAGTGCGCCG GATGTTCGAG
GCGGTCGGCC TGATGGTGAG CCGGCTGATC CGTACGCGTC ACGGCCCGAT TCCGCTGCCG
CGCGGCCTGA AGCGTGGTCG TTGGGAAGAG CTCGACGACG CACAGGTGCG CAAGCTGATG
GCGACCGTCG GCCTGAAGGC GCCGTCCGAG GAGAAGGGCA AGCGCGGCGG CGCTGCCGGT
CCGACCGAGC GTCGCCAGCC CGATCCGATG CAGACGTCGA TGGGCTTCAT CAGCCGCGAG
CCGGTGCTGA CGACGCACGG TCAACTCGAC CAGCCGCGTC GCGGCGGTGG TCGACGCGGC
GGGCCGGGCT TGCCGGGCCT GAGCGGCTAC GGCAGCTTGC CGGTCGCGCC GTCGGGTTAC
GGCAACCGCG CGGGCGGCGG CCGTGACGGC AATCGTACCG GCGGCGGCCG CGACGGCAAC
CGTGCAGGTG GCGGTCGCGA TGTCGACGGC AATCGCGCGT CGTATGGCGC GGGCCCCAAG
CGCGAAGGCG CTGGCGGCAA GCGCGGCGGC GGCAAGGGCG GTGGCAATCG CAATCCGAAC
GGCAATCGTG CCGACGGCGC CGGCAACGGC GGCCCGCGCG GCGGTCAGCG TCCGCAGCGC
AGTCGTACGC GCAGCCGCTA A
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| Protein sequence | MTDIHDIESS APAVQAARAD DAPEQDASAA GGDERPRRGL RRGPRSLIAR RRAAAKSKGA
EGEQQGAEGA DAQPAEAADA QPVRAPRKEG AAKGGRKPAG KREGAAAAKG GQAGQGRRGA
AKAEGGPAKA AEGDASQDEL FAYVTSPAFD ADNSAGGSGV RAPMLRRGRA QPANKRVLSP
DDDAPKLHKV LAEAGMGSRR EMEELIVAGR VSVNGEPAHI GQRIMPTDQV RINGKPVKRK
LPNKPPRVLL YHKPTGEIVS HADPEGRPSV FDRLPPMKTA KWLAVGRLDF NTEGLLMLTT
SGDLANRFMH PRYSVEREYA VRVVGELAEG MRQKLLHGVE LDDGPANFLR IRDGGGEGTN
HWYHVALAEG RNREVRRMFE AVGLMVSRLI RTRHGPIPLP RGLKRGRWEE LDDAQVRKLM
ATVGLKAPSE EKGKRGGAAG PTERRQPDPM QTSMGFISRE PVLTTHGQLD QPRRGGGRRG
GPGLPGLSGY GSLPVAPSGY GNRAGGGRDG NRTGGGRDGN RAGGGRDVDG NRASYGAGPK
REGAGGKRGG GKGGGNRNPN GNRADGAGNG GPRGGQRPQR SRTRSR
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