Gene Bcen_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1015 
Symbol 
ID4093309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1103878 
End bp1104915 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content67% 
IMG OID638014287 
Productputative transcriptional regulator 
Protein accessionYP_620896 
Protein GI107022569 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCC AAGAGGCGAA GATCGTCCTC GAGACTGCTT TGATCTGCGC GCAGGAACCG 
CTGAAGCTCG GCGATTTGCG CAAGCTCTTT GCCGACGGCG TGTCGGCTGA CACGGTCCGC
ACGTTACTCG AAGATCTGAA ACAGGATTGG TCCGGCCGCG GTGTCGAACT GGTGGCGCTG
GCGACCGGGT GGCGCTTTCA GAGCAAGCCG GCGATGCGTC ATTATCTGGA TCGCCTGCAT
CCCGAGAAGC CGCCGAAATA TTCGCGCGCC GTGCTCGAAA CGCTCGCGAT CATCGCGTAC
CGGCAGCCCG TCACGCGCGG CGACATCGAA GAGATTCGCG GCGTCACGGT CAATACGCAG
GTGGTCAAGC AGCTCGAGGA TCGCGGCTGG ATCGAGGTGA TCGGTCATCG CGACGTGCCG
GGGCGTCCGG CGCTGTATGC GACGACCAAG CAGTTCCTCG ACGATCTCGG CCTGAAGGCG
CTCGACGACC TGCCGGCGCT CGAAGAGCCG GCCGCGAACA TCGAGGCCGC GCTGCTCGCG
CAGCAGGCCA TGGATTTCGA CGGTGACGTC GTGGTGGCCG ACGACGCGGC GGCCGACGTG
CCGCAGGCGC TAGCGGATGA AGCGCCCGCC GACGAGTCGG CTGAAGGGCC CGGCGATGCC
GCGGCCGACG TCGCGTCGAC GCAGGAAATT CCGAGTCGCG ATACGCTCGA TGCTGATCGC
GGGCAAACGG AACAGATGGA ACAGGTTGGC GCCGAAGCAG TGCCGACCGG TGTGCAGCCC
GAGCCGCAGC GTGCGGATTG GAGTGAGGAA GATCGCAAGC CGGCTGCCGA AGCGGCTGCC
GGAGACGGAG CGGAAGCGGC CGGCGACATG CCCGGCGAGG CCGATCAGGC CGACGCCTCC
CGCTCCCGTC CCGCGGACGA CGAGACGCTG GACGACACGT CCGACAGTCT CGCGGATGCC
GTCCGAAGCG CCAGTGCGCC CATCGGCGCC GACGCGCTGC CGGACGACGA AGCAGAACCC
GAACAGCGTC GCGCCTGA
 
Protein sequence
MNTQEAKIVL ETALICAQEP LKLGDLRKLF ADGVSADTVR TLLEDLKQDW SGRGVELVAL 
ATGWRFQSKP AMRHYLDRLH PEKPPKYSRA VLETLAIIAY RQPVTRGDIE EIRGVTVNTQ
VVKQLEDRGW IEVIGHRDVP GRPALYATTK QFLDDLGLKA LDDLPALEEP AANIEAALLA
QQAMDFDGDV VVADDAAADV PQALADEAPA DESAEGPGDA AADVASTQEI PSRDTLDADR
GQTEQMEQVG AEAVPTGVQP EPQRADWSEE DRKPAAEAAA GDGAEAAGDM PGEADQADAS
RSRPADDETL DDTSDSLADA VRSASAPIGA DALPDDEAEP EQRRA