Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0955 |
Symbol | |
ID | 4092901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1040466 |
End bp | 1041827 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638014226 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_620837 |
Protein GI | 107022510 |
COG category | [S] Function unknown |
COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.310452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGACGC GAATCACGCA GCGCACGGTG AACCTGCGCA CGGCGGCGCT GCGCGCGGCC TGCGCGGTCG CGTTGGCGTT CGCCGCGCAG CAGGCCGCGG CGCAGCCGCC CGCCGCCGCG GGCAAGACGG TCGTCTATCG CACGCAGGCC GGCGACACGC TGTACGACGT CGCCGCGCGC TACCTGCAGG GCGCGGACGA CTGGCAACTG CTCCAGCAGA TCAACGGCGT GCCGGCGCCG AAGCGCCTGC AGCCCGGCAT CGCGCTGAAG CTGCCGGTCG CGCGCCTGCG CAAGGAAAAG CTCACCGCGC GCGTGATCGC GGTGCAGGGC ACGGCCGAGC GTGCGTCCGG CGCGGCTTTC GCGCCGCTCG CGAACGATGC GACGCTCGCC GAAGGCGATC GCGTGCGCAC CGGCCCGAAC GGCTTCGTGA CGATCGAGCT GGCCGACGGC ACGCACATGA GCCTGCCGCC CGACAGCCAG CTTGACCTGA AATCGCTGCG CCGCACGGTG CTGACCGGCA CGCTCGATCG CGAGTTCGAA CTCACGCGCG GCTCGGTCGA CAGCGAAGTC ACCCACCTGA AGAAACGCGA CGACCGCTTC CAGATCCGCT CGCCGTCGGT CGTGGCCGGC GTGCGCGGCA CGCGCTTTCG CGTGAACTAC GACGCGGCCG GCACGGCGAC GACGCGCGTC GAAGTGCTCG ACGGCACCGT CGGCGTCGCG GGCGGCCGGC AGTCGGCCGA CGCGACGCTC GTGCATGCGA ATTTCGGCAG CGTCGCGACG TCGTCCGGCG CGGTCGGCGC GCCCGTCCAG CTGCTGGGCG CCCCCGCGCT CGCGCATCCC GACAAGGTGC AGGACGAGCC CGACGTCGCA TTCGACGTCA CGCCGCTCGC GCAGGCGCAT GCGTATCGCG TGCAGCTCGC GCACGATGCG GGGCTGCTCG ACCTGTTCCG CGAAACGCGC ACCGATTCGC CGCGCGCGGT GTTCCGCGAC GTGCCGAACG GCAACTACTT CGTGCGGATC GCCGCGATCG ATGCGAACGG CCTCGAGGGG CTGCCGCGCA CCTATGCGTT CGAACGCCGC GTGATGGGGC TCGACGCGAG CGCGTCGCAG GGCGCGGGCG GTTACGAGTT CCGCTGGTCG CCGAACGGCT CGGGCAAGAA TGCGCGTTAC CGGTTCGTGT TGTCGCGCTC GAAGGACCTG AGCGCGCCGG TCGTCGACCA AGTCGGCCTG CACGCGCGCC AGATCACCGT CGCGCACCTG CCGCCGGGCG ACTATTTCTG GGCCGTGACC GTCGAGGAAT TCGAAGGCGG CAAGTTCTAC GAGAAGACCA GTCCGGTCAG CGCGTTCACG TTGTCGCGCT GA
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Protein sequence | MTTRITQRTV NLRTAALRAA CAVALAFAAQ QAAAQPPAAA GKTVVYRTQA GDTLYDVAAR YLQGADDWQL LQQINGVPAP KRLQPGIALK LPVARLRKEK LTARVIAVQG TAERASGAAF APLANDATLA EGDRVRTGPN GFVTIELADG THMSLPPDSQ LDLKSLRRTV LTGTLDREFE LTRGSVDSEV THLKKRDDRF QIRSPSVVAG VRGTRFRVNY DAAGTATTRV EVLDGTVGVA GGRQSADATL VHANFGSVAT SSGAVGAPVQ LLGAPALAHP DKVQDEPDVA FDVTPLAQAH AYRVQLAHDA GLLDLFRETR TDSPRAVFRD VPNGNYFVRI AAIDANGLEG LPRTYAFERR VMGLDASASQ GAGGYEFRWS PNGSGKNARY RFVLSRSKDL SAPVVDQVGL HARQITVAHL PPGDYFWAVT VEEFEGGKFY EKTSPVSAFT LSR
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