Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0949 |
Symbol | |
ID | 4092895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 1034845 |
End bp | 1035804 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638014220 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_620831 |
Protein GI | 107022504 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.53677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCCAG TCGAGCCCCG GGCCGCGCCG GCCAGCCGCG CGCGCGCATC GGGGCCGTCA ACTTCGCGCT ATCCGATGAG CTCATCCGAG AAACCTCCCG CCACCGTCGA GGCGTTCCTG CAGCACCTGA CGCAGGAGTA CGACGGCCTC AGCAATCGCC TGAAGGTGAT CGCGCGCCAC GTGGAAACGC ATCGGGACCA GCTTGGGCTG GAAGGCATCC AGTCGCTCGC GGAAGCCTGC GGCGTCCAGC CGTCGGCCGT CGTGCGCTTC GCGAAGCACT TCGGCTTCTC CGGTTTCTCC GAGATGCAGC GGCTGTTCCG CGAGGGGCTC GCGCAGCAGA TCGCGCCGGG GCGTGCGTAC AACCTGCGGC TGCGCGACGT GATCGAAGCC GGCTCGTCGA GCCTGCAGCC CGAACAGATC GCCGACGAAT TCATCAAGGG CAGCATTGCC GGGATGCAGC AGTTGCGGCA GACGCTCGAT TCGCACGCAC TCGCGCAGGC CGTCGACCTG CTCGCCGATA CGCAGGCGAT CTGGATCGCC GGGTCGCGGC GTGCATTTCC GATCGCCGTG TATCTCGACT ATGCGCTGCA GCACACCGAC AAGCGCATCG GGCTGTTCGA CGCGCTCGGC AGCATGCATC TCGGCCAGAT CCGCTCGGTG CGCAAGGGCG ACGTGATGAT CGCGATCTCG TTCATGCCGT ATGCGGACGA GACCGTGCAG GTCGCGCAGC AGGCCGCGCA GCGCGGCGCA CGCTTGATCG CGATCACCGA CAGCCGGATG AGCCCGCTCG CGCGGGAGGC GGAAGTGACG TTGATGGTGC AGGACAGCGC GACGTTCGGT TTCCGCGCGC TGACGGCCAC GATGGGTCTC GCGCAGAGCC TGTTCGTCGC GCTCGCGTAC CGGCTGGAGC TGTCGTACCT GCCGACCGCC GACGGCACGC ACGGCACGAA GGCCGGTTGA
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Protein sequence | MYPVEPRAAP ASRARASGPS TSRYPMSSSE KPPATVEAFL QHLTQEYDGL SNRLKVIARH VETHRDQLGL EGIQSLAEAC GVQPSAVVRF AKHFGFSGFS EMQRLFREGL AQQIAPGRAY NLRLRDVIEA GSSSLQPEQI ADEFIKGSIA GMQQLRQTLD SHALAQAVDL LADTQAIWIA GSRRAFPIAV YLDYALQHTD KRIGLFDALG SMHLGQIRSV RKGDVMIAIS FMPYADETVQ VAQQAAQRGA RLIAITDSRM SPLAREAEVT LMVQDSATFG FRALTATMGL AQSLFVALAY RLELSYLPTA DGTHGTKAG
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