Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0940 |
Symbol | |
ID | 4093761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 1022622 |
End bp | 1024505 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638014211 |
Product | thiamine pyrophosphate enzyme-like TPP-binding |
Protein accession | YP_620822 |
Protein GI | 107022495 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3962] Acetolactate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0172702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCA CCGTAAGACT GACCGTCAGC CAGGCCCTCG TGCGCTACCT GGCCGCCCTG CGCGCCGAAG TCGTCCAGCC CGACGGCCGC ACCGAAATCC TGCCGTACTG CGGCGGCGTG TTCGCGATCT TCGGCCACGG CAACGTGGCC GGGCTCGGCG AAGCGCTCCA TGCGGAGAAA GACCGGCTGC CGACGTTTCG CGCACACAAC GAGCAAGGGA TGGCCAACGC GGCCGTCGCG TTCGCGAAAG CGAATTTCCG CCAGCGGATG ATGGCCGCGA CGTCGAGCAT CGGCCCCGGC GCCACCAACA TGCTGACCTC CGCCGCGCTC GCGCACGTCG GCCGCTTGCC GCTGCTGCTG CTGCCCGGCG ACGTGTTCGT GTCGCGGCTG CCCGACCCGG TGCTGCAGCA GGTCGAGGAT TTCGAACAGG GCGACGTCAG CGCGAACGAC TGCTTCCGGC CCGTGACGCG CTACTTCGAC CGCATCACGT CGCCGGAGCA ACTGCTCGTC GCGCTGCCGC GCGCGATCCA GGTGATGACC GATCCCGCAC AATGCGGGCC CGTGTGTCTC GCGCTGCCGC AGGACGTGCA GACGTTCGCG TACGACTGGC CCGAGGATTT CTTCGCGCCG CCGCTGATCC GGATGCGCCG GCCGCCGGCC GACGCGCTCG AACTCGCCGA TGCGCTCGAC GTGCTGAAGG CCGCGAAGAA GCCGCTGATC GTCGCCGGCG GCGGCGTGCT GTACAGCCAG GCGTGGGATG CGCTGCGCAC GTTCGCCGAT ACGCACGGCG TGCCGGTCGC CGAATCGCAG GCCGGCAAGG GCAGCCTCGC GTGGGATCAC CCGCTGAACC TCGGCGCGAT CGGCGTGACG GGCTCGCCCG CCGCGAACCG CGCGGCCGCG CAGGCCGACG TCGTGTTCGC GGTCGGCACG CGGCTGCAGG ATTTCACGAC CGGCTCGCAC GCGCTCTACG GCGACGCGAC GCTGCTGAGC CTGAACGTGC AGCCGTTCGA CGCGGGCAAG AAACGCGGCC GGCAACTGGT GGCCGATGCG CGCACCGGCC TCGGGCAACT GTCGGCCGCG CTCGCCGGCT GGCGCGCCGA TCCGGCGTGG ACCGCCGCGA ACCGCGACCA GGCCGCCGCG TGGAACGCGC GCGTGACGGA CCTGACCACG CGGATTCCGA AGGACACGCT GCCGTACGAC GCCGAAGTGA TCGGCGCGGT GCGCGACTCC GCGGCCGACG CGGGGCGCGA CAGCGCGCGC GACGATCTCG TCGTCTGCGC GGCCGGCACG CTGCCGGCCG AACTGCACAA GCTGTGGCGC AGCGGCGTAC CGGGCAACTA TCACATGGAC TATGCGTATT CGTGCATGGG CTACGAAGTC GCGGGCGGCC TCGGCGCGAA GCTCGCGCGA CCCGAGCGCG AAGTGATCGT GATCGTCGGC GACGGCTCGT ACATGATGCT CAACGCGGAA CTCGCGACCT CCGTGATGCT CGGCCGCAAG ATCATCGTCG TGATCCTCGA CAACCGCGGC TACGGCTGCA TCGAGCGGCT GCAACTCAAT TGCGGCGGCG CGAGCTTCAA CAACATGCTC GACGACTGCG TGCCCGAAGG CGGCGAACGC TCGACGATCG ACTTCGCGAT GCATGCGCGC GCGATGGGCG CCGAAGCCGT GCACGTGCGC GACGTCGGCG AGCTGCGCCA CGAAATGAAG CGCGCGCGTG CGGCGACGAC CAGCCAGGTG CTCGTGATCG ACACCACGCA CCAGCGCACG ACCGACGACG GCGGCGCGTG GTGGGAAGTC GCGGTGCCGC AGGTGTCCGA ACGCGCCGGC GTCGTGGACG CACACCGCGC GTATCTCGAC GCGAAAACCC GCCAGCGGCG CTGA
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Protein sequence | MTTTVRLTVS QALVRYLAAL RAEVVQPDGR TEILPYCGGV FAIFGHGNVA GLGEALHAEK DRLPTFRAHN EQGMANAAVA FAKANFRQRM MAATSSIGPG ATNMLTSAAL AHVGRLPLLL LPGDVFVSRL PDPVLQQVED FEQGDVSAND CFRPVTRYFD RITSPEQLLV ALPRAIQVMT DPAQCGPVCL ALPQDVQTFA YDWPEDFFAP PLIRMRRPPA DALELADALD VLKAAKKPLI VAGGGVLYSQ AWDALRTFAD THGVPVAESQ AGKGSLAWDH PLNLGAIGVT GSPAANRAAA QADVVFAVGT RLQDFTTGSH ALYGDATLLS LNVQPFDAGK KRGRQLVADA RTGLGQLSAA LAGWRADPAW TAANRDQAAA WNARVTDLTT RIPKDTLPYD AEVIGAVRDS AADAGRDSAR DDLVVCAAGT LPAELHKLWR SGVPGNYHMD YAYSCMGYEV AGGLGAKLAR PEREVIVIVG DGSYMMLNAE LATSVMLGRK IIVVILDNRG YGCIERLQLN CGGASFNNML DDCVPEGGER STIDFAMHAR AMGAEAVHVR DVGELRHEMK RARAATTSQV LVIDTTHQRT TDDGGAWWEV AVPQVSERAG VVDAHRAYLD AKTRQRR
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