Gene Bcen_0938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0938 
Symbol 
ID4093759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1020757 
End bp1021575 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content68% 
IMG OID638014209 
Productmyo-inositol catabolism IolB region 
Protein accessionYP_620820 
Protein GI107022493 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3718] Uncharacterized enzyme involved in inositol metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.197949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTT CTCCCCTGCT GGTCAAGGCA TCCGCCGACC GCGAGATCTG CAACGTCACG 
CCCGAATCGG CCGGCTGGAA GCACGTCGGC TTTCGCGCGC TGCGCCTGAA GGCTGGCGAT
ACCGAAACGG TCGACACCGG CACGCGCGAA CTGTGCGTCG TCGTGCTGAC GGGCACGGTG
CGTGCCGAAG TCGACGGCGA AACCTACGAT GCGCTCGGCA AGCGCGACAG CGTGTTCGAG
GACGTGTCGC CGGACGCGCT GTACGTGCCG GGCGGCAAGC GCGTCACGCT GGTCGCGACG
CGCGATGCGG AAGTCGCGCT GTGCACCGCG CCGTACGCGA GCGGCGACAA GCGCGTGCTG
CGCCTCGACG GCGAGCGGAT GCGCCGCTCG GTGCGCGGGC AAGGCACCAA CACGCGCTAC
GTCTGCGACA TCCTGATGGG CGACAATCCG GCCGCCGACC GGCTGCTCGT CGTCGAAGTC
GTCACGCCGG CCAGCCATTC GAGCAGCTAT CCGCCGCACA AGCACGACCG CGACTCGGCG
CCCGACGAGA CGTCGCTCGA GGAAACCTAT TACCACCGGA TCGATCCGCC GCAGGGTTTC
GCGTTCCAGC GCGTGTACAC CGACGATCGC AGCCTCGACG AGGCCTGCGC GGTCGAGAAC
CATGACGTCG TGATGGTGCC GCGCGGCTAT CACCCGGTGG TCGCGCCTCA CGGCTACAAC
CTGTACTACC TGAACGTGAT GGCGGGCCCG AGCCGCGCGT GGGCGTTCAA GAACGATCCC
GCGCACGAGT GGATGCTCGA CGCGGCGCCG AAACGTTGA
 
Protein sequence
MTISPLLVKA SADREICNVT PESAGWKHVG FRALRLKAGD TETVDTGTRE LCVVVLTGTV 
RAEVDGETYD ALGKRDSVFE DVSPDALYVP GGKRVTLVAT RDAEVALCTA PYASGDKRVL
RLDGERMRRS VRGQGTNTRY VCDILMGDNP AADRLLVVEV VTPASHSSSY PPHKHDRDSA
PDETSLEETY YHRIDPPQGF AFQRVYTDDR SLDEACAVEN HDVVMVPRGY HPVVAPHGYN
LYYLNVMAGP SRAWAFKNDP AHEWMLDAAP KR