| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0933 |
|---|
| Symbol | |
|---|
| ID | 4093754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 1016480 |
|---|
| End bp | 1017709 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638014204 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_620815 |
|---|
| Protein GI | 107022488 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.532515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAGCC GCGCACTGGC CGGATGCATG CGCTGGGCGC TGTTCGCCGC GTGCGTCGCG
CTGCCCGCGT GGCTGTGGCC GCATGGTGCG GTGCTCGGCT ATCTCGCGCA GACGGCCGCG
CTCGTCGTGC TCGCGCTGTC TTACAACCTG CAGCTCGGCA CGACCGGGCT GCTGTCGTTC
GGGCACGCGG CGTTTGCAGG CCTCGGCGCG TTCGCGGCCG CCCACTGGTT CAACCACATC
GGCGGCCCGC TGCCGCTGCT GCCGCTCGTC GGCGGCATGG CCGGCGCGGG CTTCGGGTTC
GTCGCCGGGC TGCTGGCGAC GCGCCGCTCG GGCACCGCGT TCGCGATGAT CACGCTCGGG
CTCGGCGAAT GCGTCGCGGC CGCCGCGTGG AGCGTGCCCG CGTGGTTCGG CGGAATCGGC
GGCGTGTCGA TCGACCGGGC AAGCGGCGCG CCGTGGGGCA ACGGGTATTT CGGCGCGCCG
GCCCACGCGT ATGCGGTGAT CGCCGCGTGG TGCGTCGTGT CGGCGGCGGC CATGCATGTG
CTGACGCGCA CGCCGCTCGC GCGGCTCGCG AACGCGGTGC GCGACAACCC GGCGCGCGTC
GCGGCGCTCG GCACCGATCC GCGCCGCGTG CGGCTCGCGA TGGTCACCTG CGCATCGTTC
TTCGCCGGCG TCGCCGGCAC GCTGACGCTG ATCGACGTCG AACTCGCGAC GCCCGACAGC
GTGTCGATGG CGCGCTCGGC GACCGTGCTG ATCGCCGCGG TGATCGGCGG CACCGGTGCG
TTCTTCGGGC CGGCGGCCGG CGCGGCCGTG CTGACCGCGC TGAGTATCGG CGTCGCGGGC
GTGTCGCGTG CGTGGGCGCT GTATCTGGGC GTGCTGTTCG TCGCGGTCGT CGTGGCCGCG
CCGGGCGGGA TCGCCGGCAT CGCGCGGGCG CTCGCGCATG CATTGCGGCG CGATGTACCG
GCGATCGAGC GCTGGCGGGT GCTGTGCGCG ATCGGTGCGT GCGTGTTCTG GGGCGTCGCG
ATCGTCTGCG CGGCCGAGCT CGGCTATGCG TGGCGCTTCG CGCAGGACGA CGGCACGGGC
CTCGCGTTCG GCGCATGGGG CATCGACGCC GATACGCCGG TCGGCTGGGC CGTCGCGGCT
TCGGCGGCCG GCATCGGCAC GCTGCTGTGG GGCTGGCGCG CGCGGCTCGG GCACGGCGCG
GCGGTCGCCA CGCAGGAGGA CGCACGATGA
|
|---|
| Protein sequence | MHSRALAGCM RWALFAACVA LPAWLWPHGA VLGYLAQTAA LVVLALSYNL QLGTTGLLSF
GHAAFAGLGA FAAAHWFNHI GGPLPLLPLV GGMAGAGFGF VAGLLATRRS GTAFAMITLG
LGECVAAAAW SVPAWFGGIG GVSIDRASGA PWGNGYFGAP AHAYAVIAAW CVVSAAAMHV
LTRTPLARLA NAVRDNPARV AALGTDPRRV RLAMVTCASF FAGVAGTLTL IDVELATPDS
VSMARSATVL IAAVIGGTGA FFGPAAGAAV LTALSIGVAG VSRAWALYLG VLFVAVVVAA
PGGIAGIARA LAHALRRDVP AIERWRVLCA IGACVFWGVA IVCAAELGYA WRFAQDDGTG
LAFGAWGIDA DTPVGWAVAA SAAGIGTLLW GWRARLGHGA AVATQEDAR
|
|---|
| |