Gene Bcen_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0926 
Symbol 
ID4092757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1007746 
End bp1008966 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content70% 
IMG OID638014197 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_620808 
Protein GI107022481 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCCC TGAGCCATAT CCGCGTGCTG GACCTGACCC GCGTGCTCGC GGGCCCGTGG 
TGCGCGCAGA CCCTTGCCGA CTTCGGCGCG GACGTGATCA AGGTCGAGCG GCCGGGCGCC
GGCGACGACA CGCGCCACTG GGGGCCGCCG TACCTGAAGG ACGCGGACGG CGCGGATACC
GCCGAGGCCG CGTACTACCT CGCGGCGAAC CGCAACAAGC GCTCGGTGAC GATCGACATC
GCAACGCCCG AAGGGCAGCA AATCGTGCGC GAACTCGCCG CGCAGAGCGA CGTCGTGCTC
GAGAACTACA AGGTCGGGCA ATTGAAGAAG TACGGGCTCG ATTACGACTC GCTGCGGGCG
GTGAAGCCCG ATCTCGTCTA CTGCTCGGTC ACCGGCTTCG GCCAGACCGG CCCGTACGCG
CACCGCGCGG GCTACGACTT CATCGTGCAG GGGATCGGCG GCTTCATGAG CATCACCGGC
GAACGCGACG GCGAGCCGGG CGGCGGCCCG CAGAAGGCCG GCGTCGCGAT CGCCGATCTC
GCGACCGGCC TCTATTCGAC GATCGCCGTG CTCGCCGCGC TCGCGCATCG CGACCGCACG
GGCGAAGGCC AGTACATCGA CATGGCGCTG CTCGACGTGC AGGTCGCGCT GCTCGCGAAC
ATGAACACCA ACTTCCTCGC GAGCGGCAAG CCGCCGGTGC GCTGGGGCAA CGCGCATCCG
AACATCGTGC CGTACCAGAC GTTCCAGACG CGCGACGGCT GGATCATCGT CGCGGTCGGC
AACGACGGGC AGTTCCGCAA GTTCGTCGAG GCCGGCGGCC GGCCCGAGCT GGCCGACGAC
GAGCGCTTCG CGACGAACCC GTCGCGCGTG CGTCACCGCG ACACGCTGGT GCCGATCCTC
GCGGAGATGG TGAAGGCGCG CGGCAAGGCC GACTGGATCG GCGCGCTCGA AGCGGCCGGC
GTGCCGTGCG GGCCGATCAA CGATCTCGAC GAGGTGTTCG ACAACGAGCA GGTGGTCGCG
CGCGGGATGC AGGTGTCGCT GCCGCACCCG TGCGGCGCGG ACGTGAAGCT CGTGCGCAAC
CCGATCCGGA TGAGCGCCAC GCCGCCGGAC GCGCGCACGG CCCCGCCGCT ACTCGGCGCG
CAGACGGAAG ACGTGCTGCG CGACATGCTC GGCTACGACG ACGTGCGGAT CGCCGCGTTG
AAGGCGAAAC AGGCGATCTG A
 
Protein sequence
MGALSHIRVL DLTRVLAGPW CAQTLADFGA DVIKVERPGA GDDTRHWGPP YLKDADGADT 
AEAAYYLAAN RNKRSVTIDI ATPEGQQIVR ELAAQSDVVL ENYKVGQLKK YGLDYDSLRA
VKPDLVYCSV TGFGQTGPYA HRAGYDFIVQ GIGGFMSITG ERDGEPGGGP QKAGVAIADL
ATGLYSTIAV LAALAHRDRT GEGQYIDMAL LDVQVALLAN MNTNFLASGK PPVRWGNAHP
NIVPYQTFQT RDGWIIVAVG NDGQFRKFVE AGGRPELADD ERFATNPSRV RHRDTLVPIL
AEMVKARGKA DWIGALEAAG VPCGPINDLD EVFDNEQVVA RGMQVSLPHP CGADVKLVRN
PIRMSATPPD ARTAPPLLGA QTEDVLRDML GYDDVRIAAL KAKQAI