| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0909 |
|---|
| Symbol | |
|---|
| ID | 4092740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 990723 |
|---|
| End bp | 992303 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638014180 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_620791 |
|---|
| Protein GI | 107022464 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACG TCGAGCTGTT CCATTACCTG TTGCTGTTGA TCTGCGGCGC GGGCGCCCTC
ACCTGGCTCG CCGAGCGCGT GTCGATTCCG CCGGCCGTCG TGCTGCTGCT CGGCGGCTGC
GTGGTCGCCG TCGCCGGCAA GCGCGTGCCC GACATGGACC CGGCGCTGCT GCTCGCGGCC
GTGCTGCCGC CGCTGCTGAT GTCGAGCGGG TTCTACACCG CGTGGAAGGA ATTCCGGCAG
GAGCTCGCGT CGATCGCGTC GCTCGCGCTC GGGGCCGTGG CGTTCACGAC CGTCGCGGTC
GCGCTCGCCG TGCATGCGGC CAATCCGTCG CTGCCGTGGG CCGCGTGCTT CACGCTCGGC
GCGATCGTGT CGCCGCCCGA CGCGGTCGCC GCAAAGGCGA TCCTGCAGCG CCACCCGCTG
CCCGCGCGGC TCGTCGCGGT GCTCGAAGGC GAAAGCCTCG TCAACGATGC GTCGGGCCTG
CTGCTGTACC AGATGGCCGT ATCGGCCGCG CTCGCCGCCA CGATCACGAC CGCGAGCGCG
ACCGGCCTGT TCTTCTCGCT CACGCTGATC GGCATCGCGG TCGGCCTCGC ATGCGGCCAT
GCGATGTGCT GGGTGCTGCA ACGCCTGCGC GAACCGATGC TCGGCATCGT CGTGACGTTC
GCGATGGCAT GGGGCAGCTA CGGGATCGCG GAAGCCGTCG ACGGCTCGGG CGTGCTGTCG
GTCGTCACCT GCGGCCTCGT GCTCGGCGTG CGCCAGCATC GCGTGTTCGG CGCCGACATG
CGGATCAAGG CGAAGGCGAC GTGGGAAGCG ATCGTGTTCG TACTCGACGC GCTCGTGTTC
ATCCTGATCG GCCTCGCGCT GCACGCGATT CTCGCGGGCG TGAACCACGA AGGCGCGGTG
CTGATGGCCG GCCTGCGGGT CGCGCTGCCG GCGACGGCCG CCGCGATCGG CGCGCGCGTA
GTGTGGGTGT TCGTCGCGAT GTGGCTGCCG GGCCGCCTGC GCGCGCGGCG CGCGGGCCAC
GCGGCATGGT CGTGGCGCGA AGCCGTCGTC CTCGGCTGGT CGGGCATGCG CGGCGTCGTG
AGCCTCGCGG CCGCGATTGC GCTGCCGGCC AATTTCCCCG GCCGCGACCT GATCCTGTTC
AGCACGTTCC TGCTGATCAT CGCGACGCTC GTCGTGCAGG GCGGCACGCT CGCGCCGCTG
ATCCGCGTGC TGAAGCTGCG CCCGGCCGCG CGCCGCACGA TGTCCGAACA TGCGGTGCGG
GCGCACACGT TCGGCGCGGC GCTCGCCGAG CTCGATGCGC GCGAGCAACG CGGCGCGGGC
CTCGAACGCG CGTCGCTCGA CCGGCTGCTG ACCGAATACC GGAGCCGCGT CGCGTTCAAC
GAGCACGCAC ATCGCGACGG CGCGGAGCCC GCGGACGTGC GCGCGCGGAT GCTGCGCGTC
GAGCTCGAGC TGGTCGGCGT GTCGCGCGAC GCGTTGCTCG ACCTGCATCG CGACGGCCGG
GTCGACGACG CGGTGCTGCA CCGCATAGAA TCGGAGCTCG ATTTCGAGGA GTTGCGGCTG
CAGCGCCTGC TCGAACCTTA A
|
|---|
| Protein sequence | MTNVELFHYL LLLICGAGAL TWLAERVSIP PAVVLLLGGC VVAVAGKRVP DMDPALLLAA
VLPPLLMSSG FYTAWKEFRQ ELASIASLAL GAVAFTTVAV ALAVHAANPS LPWAACFTLG
AIVSPPDAVA AKAILQRHPL PARLVAVLEG ESLVNDASGL LLYQMAVSAA LAATITTASA
TGLFFSLTLI GIAVGLACGH AMCWVLQRLR EPMLGIVVTF AMAWGSYGIA EAVDGSGVLS
VVTCGLVLGV RQHRVFGADM RIKAKATWEA IVFVLDALVF ILIGLALHAI LAGVNHEGAV
LMAGLRVALP ATAAAIGARV VWVFVAMWLP GRLRARRAGH AAWSWREAVV LGWSGMRGVV
SLAAAIALPA NFPGRDLILF STFLLIIATL VVQGGTLAPL IRVLKLRPAA RRTMSEHAVR
AHTFGAALAE LDAREQRGAG LERASLDRLL TEYRSRVAFN EHAHRDGAEP ADVRARMLRV
ELELVGVSRD ALLDLHRDGR VDDAVLHRIE SELDFEELRL QRLLEP
|
|---|
| |