Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0896 |
Symbol | |
ID | 4092373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 971856 |
End bp | 973049 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638014167 |
Product | diguanylate cyclase with GAF sensor |
Protein accession | YP_620778 |
Protein GI | 107022451 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.225893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAA TTGCGCCGTT GCCGCCGGAT GGCTGGAACG GCATACTGCC GGCGCGGTAC GGCTGGCCGG GCACCGGCCA CGTTCCGGTG CGAACCGCCC GGCACGCGCT GCCGCGAGCG GCGCGTATGC TACCGCAAGC GCGCGCCGCG CGATGCACTT TTTCACGGAA AACTGACTTG AATCAAACCA CCGACGCCGC CACGCCGTCC CCCGACACGT TGTTGCGCAT CATCGCCGCG CAAGCCGAAA TCGCGAAACT CGGCCTCGAC CTCGGCAGCG TGATGGCCTA CGTGGCCGAA CAGGTGCCCC AGCTCACCGG CGCGAGCGCC GCCGCGGTCG AATTCGCCGA AGGCGACGAC ATGGTGTACC GCGCCGCGTC GGGCACGGCC GCCGGGATGC TCGGCCTGCG GTTGCGGCGC TCGGGCAGCC TGTCGGGCCT GTGCGTGCAG CAGGGCGCGT TGCTGCACTG TATCGATTCG GAAACCGACC CACGCGTCGA TCGCGACGCA TGCCGCCGGG TCGGCCTGCG CTCGATGCTC GTGATGCCGC TCACGCACGC CGACACGACG GTCGGCGTGC TGAAGGTGAT GTCGCCGGAC GTCGACGGTT TCTCACCGGC CGACGCCGGC ACGCTGCGGC TGATGGCCGA CCTGATCGCC GCCGCGATGT TCCACGCGGC GCGCAACGAA GCGAACGAGC TGTACCTGCG CGCGACGCAC GACGCGCTCA CGGGCCTGCC GAACCGCGCG CTGTTCTACG ACCGCCTGCG CCAGTCGATG CACACGGCGC TGCGCGCGAG CGGCCGGCTC GGCATTCTCA ACATCGACAT GGACGGCCTG AAGCCGATCA ACGACGGGTT CGGCCACCGC GCGGGCGACG CCGCGCTGCG CGAGGTCGCC ACGCGGATGC AGGCCGCGGT GCGGCGCTCG GACACGGTCG CGCGCATCGG CGGCGACGAA TTCGCGGTGA TCCTGCCGAA CCTCGGCACC CGCGACGACG CCCAGGTGCA AAGCACGCGG CTCGCGCGGC AGGTCGGCGA GCCGTTCGAA TTCGACGGGC ATGCGCTGCG GCTCGGCGTC AGCGTCGGCA TCGCGATGCT GCCGGACGAC GGCACCGACA TGAACGCGCT GATCGAGCAT GCGGACCAGG CGATGTACGA AGCCAAGCGA TCGCGGCGCA CCGCGCACGC ATGA
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Protein sequence | MARIAPLPPD GWNGILPARY GWPGTGHVPV RTARHALPRA ARMLPQARAA RCTFSRKTDL NQTTDAATPS PDTLLRIIAA QAEIAKLGLD LGSVMAYVAE QVPQLTGASA AAVEFAEGDD MVYRAASGTA AGMLGLRLRR SGSLSGLCVQ QGALLHCIDS ETDPRVDRDA CRRVGLRSML VMPLTHADTT VGVLKVMSPD VDGFSPADAG TLRLMADLIA AAMFHAARNE ANELYLRATH DALTGLPNRA LFYDRLRQSM HTALRASGRL GILNIDMDGL KPINDGFGHR AGDAALREVA TRMQAAVRRS DTVARIGGDE FAVILPNLGT RDDAQVQSTR LARQVGEPFE FDGHALRLGV SVGIAMLPDD GTDMNALIEH ADQAMYEAKR SRRTAHA
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