Gene Bcen_0877 details

Gene Information

• Locus tag: Bcen_0877
• ID: 4092297
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: +
• Start bp: 952340
• End bp: 952849
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638014148
• Product: ECF subfamily RNA polymerase sigma-24 factor
• Protein accession: YP_620759
• Protein GI: 107022432
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGCTG ACAAGCTGTC CCTCCATCGA GAAATCGACG CCCTCTATGT CGGCCACCAC 
GCGTGGCTGC GCGGCTGGCT GAGCCGGAAG CTCGGTTGCG CACACCGCGC GGCCGACCTG 
GCGCACGACA CGTTCGTGCG CCTGCTCGCA CGCGACGAGC CGATCGGCGC CGACGAGCCG 
CGTGCGTTCC TGACCACGGT CGCGCAGCGT GTGCTGAGCA ACCACTGGCG GCGCGAGCAG 
ATCGAGCGCG CGTATCTCGA CGTGCTCGCG CAGCGCCCGG AAGCGGTTGG GCCGTCGCCG 
GAAGAGCGGG CCGTCATGGT CGAGACGCTG CTCGAGATCG ACCGGCTGCT CGACGGCCTG 
CCGCCCGCGG CGAAGCGTGC GTTCCTGCTC GCACAGCTCG ACGGGCTCAC GCAGGTCGAG 
ATCGCGCGCC AGCTCGGCGT GTCGCTCGCG ACGGTGAAGC GCTATCTCGT GAAGGCCGGC 
ACGCAGTGCT TCTTCGCGAT GGCGGCCTGA 

 

Protein sequence

MSADKLSLHR EIDALYVGHH AWLRGWLSRK LGCAHRAADL AHDTFVRLLA RDEPIGADEP 
RAFLTTVAQR VLSNHWRREQ IERAYLDVLA QRPEAVGPSP EERAVMVETL LEIDRLLDGL 
PPAAKRAFLL AQLDGLTQVE IARQLGVSLA TVKRYLVKAG TQCFFAMAA