Gene Bcen_0816 details

Gene Information

• Locus tag: Bcen_0816
• ID: 4093260
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: +
• Start bp: 881989
• End bp: 883872
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638014086
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_620699
• Protein GI: 107022372
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTTCGA AGGCAGCGGT GTGGCTGGTG ATCGCACTGG TGCTGTTTAC GGTGTTCAAG 
CAGTTCGACA AGCCCCGCGT CCAGGAAGGC GTGTCCTATT CGCAGTTCAT GGACGACGCC 
AAGAACGGCA AGGTCAAGAA CGTCATCGTT CAGGGGCGCA ACCTCACCGT CACTCCGGCT 
GATGGCCAGA AATACCAGAT CGTGTCGCCC GGCGACATCT GGATGGTCGG CGATCTGATG 
AAGTACGGCG TGCAGGTCAG CGGCAAGGCC GACGACGAGC CGAACGCGCT GATGTCCGCG 
CTGTACTATC TCGGGCCGAC GATCCTGATC ATCGTGTTCT GGTTCTACAT GATGAGGCAG 
ATGCAGGGAG GCGGCAAAGG CGGCGCATTC TCGTTCGGGA AATCGCGTGC GCGGCTGATC 
GACGAGAACA ACAACGCGGT GAACTTCTCC GACGTCGCGG GCTGCGACGA AGCGAAGGAA 
GAAGTGTCCG AGCTCGTCGA CTTCCTGCGC GATCCGCAGA AATTCCAGAA GCTGGGCGGC 
CGCATTCCGC GCGGCGTGCT GCTGGTCGGC CCGCCGGGTA CCGGCAAGAC GCTGCTCGCC 
CGCGCGATCG CGGGTGAAGC GAAGGTGCCG TTCTTCAGCA TCTCGGGTTC GGACTTCGTC 
GAAATGTTCG TCGGCGTCGG CGCGGCCCGT GTGCGCGACA TGTTCGAGCA GGCGAAGAAG 
CATGCACCGT GCATCGTGTT CATCGACGAA ATCGACGCGG TCGGCCGTCA TCGCGGCGCC 
GGCATGGGCG GCGGCAACGA CGAGCGCGAA CAGACGCTGA ACCAGATGCT CGTCGAGATG 
GACGGCTTCG AGGCGAATTC AGGCGTCATC GTGATCGCCG CGACCAACCG TTCCGACGTG 
CTCGACAAGG CGCTGCTGCG TCCGGGCCGT TTCGACCGCC AGGTCTATGT CGGCCTGCCG 
GACATCCGCG GCCGCGAGCA GATCATGCGC GTGCACCTGC GCAAGGTGCC GATCGCGAAC 
GACGTCGACG CGGCGGTCAT CGCACGCGGC ACGCCAGGCT TTTCGGGCGC CGATCTCGCG 
AACCTCGTGA ACGAGGCTGC GCTGTTCGCC GCCCGTCGCG GCAAGCGTAT CGTCGAGATG 
CAGGATTTCG AGGACGCGAA GGACAAGATC TTCATGGGTC CGGAGCGCAA GTCGGCCGTG 
ATCCGCGAGG AAGCGAAGCG CGCCACCGCT TATCACGAGT CGGGCCACGC GGTGATCGCG 
AAGCTGTTGC CGAAGGCCGA CCCGGTGCAC AAGGTCACGA TCATCCCGCG CGGTCGCGCG 
CTGGGCGTCA CGTGGCAGTT GCCGGAGCAT GACAACGAGA CGTATTCGAA GGACTACCTG 
CTGGACCGCC TCGCGATCCT GTTCGGTGGC CGGGTGGCCG AAGAGCTGTT CATGAACCTG 
GTCAGCACCG GCGCATCGGA CGACTTCAAC AAGGCCACGC AGACCGCGCG TGCGATGGTG 
GCCCGTTTCG GCATGACCGA CGCACTGGGG CCGATGGTCT ACGTCGACGA CGAGAACGAT 
GCGTCGCCGT TCGGCCGTGG CTTCACGCGT ACGATCTCGG AAGCGACGCA GCAGAAGGTC 
GACTCGGAAA TCCGCCGCGT GCTGGACGAA CAGTACAACC TCGCACGCCG CCTGCTCGAA 
GACAACCGCG ACAAGGTCGA GGCGATGACG GCCGCACTGA TGGAGTGGGA GACGATCGAC 
GCCGATCAGA TCAACGACAT CATGGAAGGC CGTCCGCCGC GCTCGCCGAA GAGCTCGCCG 
GCTGTCGGCG GCGATTCGTC GGGCGGCGGC AGCGCCGAGG TCAAGCCCGG CAGCGCGCCG 
GCGCCGGCTA CGCCGGCGGC ATAA 

 

Protein sequence

MFSKAAVWLV IALVLFTVFK QFDKPRVQEG VSYSQFMDDA KNGKVKNVIV QGRNLTVTPA 
DGQKYQIVSP GDIWMVGDLM KYGVQVSGKA DDEPNALMSA LYYLGPTILI IVFWFYMMRQ 
MQGGGKGGAF SFGKSRARLI DENNNAVNFS DVAGCDEAKE EVSELVDFLR DPQKFQKLGG 
RIPRGVLLVG PPGTGKTLLA RAIAGEAKVP FFSISGSDFV EMFVGVGAAR VRDMFEQAKK 
HAPCIVFIDE IDAVGRHRGA GMGGGNDERE QTLNQMLVEM DGFEANSGVI VIAATNRSDV 
LDKALLRPGR FDRQVYVGLP DIRGREQIMR VHLRKVPIAN DVDAAVIARG TPGFSGADLA 
NLVNEAALFA ARRGKRIVEM QDFEDAKDKI FMGPERKSAV IREEAKRATA YHESGHAVIA 
KLLPKADPVH KVTIIPRGRA LGVTWQLPEH DNETYSKDYL LDRLAILFGG RVAEELFMNL 
VSTGASDDFN KATQTARAMV ARFGMTDALG PMVYVDDEND ASPFGRGFTR TISEATQQKV 
DSEIRRVLDE QYNLARRLLE DNRDKVEAMT AALMEWETID ADQINDIMEG RPPRSPKSSP 
AVGGDSSGGG SAEVKPGSAP APATPAA