Gene Bcen_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0797 
Symbol 
ID4091550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp862929 
End bp864110 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content71% 
IMG OID638014067 
ProductPHB de-polymerase-like 
Protein accessionYP_620680 
Protein GI107022353 
COG category[I] Lipid transport and metabolism 
COG ID[COG4553] Poly-beta-hydroxyalkanoate depolymerase 
TIGRFAM ID[TIGR01849] polyhydroxyalkanoate depolymerase, intracellular 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.379839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGCAT GGCGCGCGGC GACGCGATAC GCGTTCGACG CATGGCCCGC GGCGTCGCTG 
CCGCACGCCG CGTCATCGTG CTACGACGAC CTGTTCGAAC CGCTGCTCGG CCCGCAGGCC
GCGCCGCCAG GCTTCGACCT CGCGTGGCCC GCCGTCAGCG AGCAGATCGT CGCGCACACG
CCGTTTTGCG ACTTGCGGCG CTTCGCGCAC GCCGATGCGC ACCGCACGGT GCTGCTGTGC
GCGCCGCTCG TCGGGCATGC GGCCGTGATG ATGCGGGAAA CCGCCGAAAC GCTGCTCGCC
GATGGCGACG TCTGCGTGAC CGACTGGCGC AATGCGCGCG ACGTGCCGCT TGCGGCAGGC
CGTTTCGGGC TCGACGAATA CGTCGCGATG CTCGACGGTT TCGTCAGCAC CCTCCAGCAC
GACGAGCGGC CGCTGCACGT CGTCGCCGTA TGCCAGGCGA CCGTACCGGC GCTCGGCGCC
CTGGCGCTGC GCGCCGCGCG CGGCCTCGCG CCGCCCGCGA GTATCACGCT GATCGGCGGC
CCGATCGATG CCCGCCTGAA CCCGAGCGCG CTCGGCGCCG CGGCCGCCGC CCATTCGCTC
GACTGGTGCC GGCGCCACTT GATCGACATC GTGCCGCCCG GCTTCGCCGG GCATGGCCGC
CACGTGTTCC CGACCTATCT GCAACAGGGC GAGATCGCGC TCCTGTATCC GCAACGCTTC
CTGACGCTGA TCGAGACCTA CGCGCTGGCA GCTTCCCGCT TCGACATGAC CGGGCTCGCC
GACGCCCGGC GGGCACTGCG CGAATACACG GCGCTGCTCG ACATGCCGGC CGACTATTTC
CTCGACACGG TCGACGTCGT GTTTCAGCGC ATGCTGCTCG CGACCGGCGC GTGGCATGTG
GACGGCCGGC GCGTCGAACC GGCCGCGCTG CGCGATGTCG CGCTGCTGAC CGTCGAAGGT
GCCTGCGACA GGGTCACGGG CGCCGGGCAG ACGCATGCGG CGCTCGATCT GTGCAGCGGC
CTCTCGGCCG ACGAGCGCCA TCGCATCGAC GTCGACGATT GCGATCACTA CGGGCTGTTT
ACGGGGCCAC GCTGGCACGG CAACGTCCAT CCGGCGCTGC AGCGCGTGTT CGCGCTCGCG
GAAGCCGGCC GACCACGCCC GCGCCGAAAC CGGCAAACCT GA
 
Protein sequence
MRAWRAATRY AFDAWPAASL PHAASSCYDD LFEPLLGPQA APPGFDLAWP AVSEQIVAHT 
PFCDLRRFAH ADAHRTVLLC APLVGHAAVM MRETAETLLA DGDVCVTDWR NARDVPLAAG
RFGLDEYVAM LDGFVSTLQH DERPLHVVAV CQATVPALGA LALRAARGLA PPASITLIGG
PIDARLNPSA LGAAAAAHSL DWCRRHLIDI VPPGFAGHGR HVFPTYLQQG EIALLYPQRF
LTLIETYALA ASRFDMTGLA DARRALREYT ALLDMPADYF LDTVDVVFQR MLLATGAWHV
DGRRVEPAAL RDVALLTVEG ACDRVTGAGQ THAALDLCSG LSADERHRID VDDCDHYGLF
TGPRWHGNVH PALQRVFALA EAGRPRPRRN RQT