Gene Bcen_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0790 
Symbol 
ID4093708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp857346 
End bp858275 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID638014060 
Productmalonate decarboxylase subunit beta 
Protein accessionYP_620673 
Protein GI107022346 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR03133] malonate decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.052226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGCG ATATTCGTCA TATCCATGAC GCCCCCGCGT TCGTCGCGAA CGCGGCGAGC 
TGGTACGAAG CGTCGGCGCG GCAACGCATC GACGGGCTGC TCGACGCGGG CAGCTTCACG 
GAATTCCTCG GGCCGGCCGA GCGCGTGACG AGCCCGCACC TGCCGCTGTT CGCGCTGCCG 
CAGCAGTTCG ACGACGGGAT GGTGGTCGGC CACGGCCGGC TCGATGGCAA GCCGGTGTTC 
GTCGCCGCGC AGGAGGGCCG CTTCATGGGC GGCGCGTTCG GCGAAGTGCA CGGCGCGAAG 
CTCACCGGGC TGCTGCGCGC CGCGCGTGAC GTCGGCAAGC CGGTGCTGAT CCTGTTCGAC 
ACGGGCGGCG TGCGGTTGCA GGAAGCGAAC GCGGGCGAGC TCGCGATCGC CGAGATCATG 
CGCGCGCTCG TCGACGCGCG GGCGGCCGGC GTGCCGGTGA TCGGGCTGAT CGGCGGGCGC 
GCGGGCTGCT ACGGCGGCGG CGGGTTGCTC GCCGCGTGCT GTTCGGCGCT CGCGGTGTCG 
GAGCAGGGGC GCATCAGCGT GTCGGGGCCT GAAGTGATCG AGACCAATCG CGGCGTCGAG 
GAATTCGACT CGAAGGATCG CGCGCTGATC TGGCGCACGA TGGGCGGCAA GCATCGCCGC 
TTGATCGGCG GCGCCGATCG TTACGTGGCC GATACGCCGG ACGCGTTCCG CGCGGCCGCG 
CTCGACCTGA TCGGCCGCGC GCCGACGTTC GATGCGGCGA TGCTGCGTGA GGAACAGGCG 
CGTCTCGAAG CACGGATCGA GCGGTTCGGC GGCTGCCGGG ATGCGCTCGA CGTGTGGCGT 
GCGCTCGGGG CCGACGCGCC GGAAGCGATT CCGGGCATGT CCGACGACGA ATTCGCGAAG 
CTCGCCGACC AGTTACAGGA GCAGAAATGA
 
Protein sequence
MMSDIRHIHD APAFVANAAS WYEASARQRI DGLLDAGSFT EFLGPAERVT SPHLPLFALP 
QQFDDGMVVG HGRLDGKPVF VAAQEGRFMG GAFGEVHGAK LTGLLRAARD VGKPVLILFD 
TGGVRLQEAN AGELAIAEIM RALVDARAAG VPVIGLIGGR AGCYGGGGLL AACCSALAVS 
EQGRISVSGP EVIETNRGVE EFDSKDRALI WRTMGGKHRR LIGGADRYVA DTPDAFRAAA 
LDLIGRAPTF DAAMLREEQA RLEARIERFG GCRDALDVWR ALGADAPEAI PGMSDDEFAK 
LADQLQEQK