Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0788 |
Symbol | |
ID | 4093706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 855378 |
End bp | 857024 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638014058 |
Product | hypothetical protein |
Protein accession | YP_620671 |
Protein GI | 107022344 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.141996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGAT GGAATCACGC GCGGCAGGCG CGCGATGCAC GCCTCGCGGC CGGCGCGGCA TACGCGCAGG GCAAGCGGGT CGATGCGCGC GACACCGTCG CGTTGCTCGA AGCGGTGCTG CGGCCCGGCG ATCGCGTGTG CCTCGAAGGC GACAACCAGA AGCAGGCCGA TCTGCTCGCC ACCGCGCTCG CCGACGTCGA CAGCGCGAAG ATCCACGACC TGCACATGGT GCAGTCGGGC GTCGTGCTGC CCGAGCATCT CGACGTGTTC GAGCGCGGCA TCGCGAAGCG GCTCGACTTC GCGTATTCGG GCCCGCAGTC GCAGCGCATC GCGAAGCTGC TGTTCGGCGG CAAGATCGCG CTCGGCGCGG TGCATACCTA TCTCGAGCTG TTCGCCCGCT ACTTCATCGA CCTCACGCCG CAGGTCGCGC TGATCGCGGC CGTGAGCGCC GATCGCGACG GCAACCTGTA CACCGGCCCG AACACCGAGG ACACGCCGAC CGTCGTCGAA GCGACCGCCT TCAAGGACGG CATCGTGATC GCGCAGGTCG ACCGCATCGT CGACAAGGTG CCGCGCGTCG ACATTCCGGG CGATCGCGTG CATTTCGTCG TCGAGGCCGG CCGGCCGTTC TACGTCGAGC CGCTGTTCAC GCGCGATCCG GCCGCGATCA CCGAAACGCA GATCCTCACC GCGATGCTCG CGATCAAGGG CATCTACGAA CCGTACGGGA TCAAGCGTCT GAACCACGGA ATCGGCTTCA ACACGGCCGC GATCGAGCTG CTGCTGCCGA CCTACGGCGC GAAGCTCGGG CTGAAGGGCA AGGTCTGCAC GCACTGGGCG CTCAATCCGC ACCCGACGCT GATCCCCGCG ATCGAATTGG GGTGGGTCGA GCAGGTCCAC TGCTTCGGCT CCGAGGTCGG GATGGACGAC TACATCCGCG CGCGCTCCGA CGTGTGGTTC ACGGGCCCCG ACGGGTCGCT GCGCTCGAAC CGGGCGTTCT GCCAGACGGC CGGCCTCTAT GCATGCGACA TGTTCATCGG CTCGACGCTG CAGATCGACC TGTCCGGCCA TTCGTCGACG GTCACGGCCG AGCGGATCGC CGGCTTCGGC GGCGCGCCGA ACATGGGCAG CGACGCGCGC GGCCGGCGCC ATCCGAGCGA GCCGTGGCTG AAGGCCGGCG CGGAAGCCGA CCCCGACACG CCGGCGGCGC TGCGGCGCGG CCGCAAGCTG GTCGTGCAGA TCGGCGAGAC GTTCGGCGAC AAGAACGTGC CGATGTTCGT CGAGAAGCTC GACGCGCTGA AGCTCGCCGA CAAGCTGCAG CTCGACCTCG CGCCGATCAT GGTCTACGGC GACGACGTCA CGCACATCGT CACCGAGGAA GGGATCGCGA ACCTGCTGAT GTGCCGCGAC AAGGACGAAC GCGAGCACGC GATTCGCGGC GTCGCCGGCT ATACCGACGT CGGCCGCGGC CGCGACAAGA AGCTGGTCGA GCGGCTGCGC GAACGCGGCG TGATCCGTCG CCCGGAGGAT CTCGGTATCG ATCCGCTCGA CGCCGACCGC CGCTGGCTCG CCGCGCGGTC GATCAAGGAT CTGGTGCACT GGTCGGGCGG GCTCTATGCG CCGCCGGCCC GGTTCCGCAA CTGGTGA
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Protein sequence | MTGWNHARQA RDARLAAGAA YAQGKRVDAR DTVALLEAVL RPGDRVCLEG DNQKQADLLA TALADVDSAK IHDLHMVQSG VVLPEHLDVF ERGIAKRLDF AYSGPQSQRI AKLLFGGKIA LGAVHTYLEL FARYFIDLTP QVALIAAVSA DRDGNLYTGP NTEDTPTVVE ATAFKDGIVI AQVDRIVDKV PRVDIPGDRV HFVVEAGRPF YVEPLFTRDP AAITETQILT AMLAIKGIYE PYGIKRLNHG IGFNTAAIEL LLPTYGAKLG LKGKVCTHWA LNPHPTLIPA IELGWVEQVH CFGSEVGMDD YIRARSDVWF TGPDGSLRSN RAFCQTAGLY ACDMFIGSTL QIDLSGHSST VTAERIAGFG GAPNMGSDAR GRRHPSEPWL KAGAEADPDT PAALRRGRKL VVQIGETFGD KNVPMFVEKL DALKLADKLQ LDLAPIMVYG DDVTHIVTEE GIANLLMCRD KDEREHAIRG VAGYTDVGRG RDKKLVERLR ERGVIRRPED LGIDPLDADR RWLAARSIKD LVHWSGGLYA PPARFRNW
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