Gene Bcen_0783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0783 
Symbol 
ID4093701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp851488 
End bp852405 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content69% 
IMG OID638014053 
Product3-hydroxyacyl-CoA dehydrogenase, NAD-binding 
Protein accessionYP_620666 
Protein GI107022339 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTC GACGTATCGC GATCGTCGGC GCCGGCGTGA TCGGCGCGAG CTGGGCCGCT 
TTCTACCTGA CGCAGGGCTT CGACGTCGTC GCGACCGACC CGGCGCCGCA AGCCAATGCA
CGGCTGCGCG ACGCGCTCGC CGCATTCCTC GGCGAGCGGG CCGCCGAGCT TTGCGCGCGG
CTGTCGTTCG ACGCCGATCT CGTGCGCGCG CTCGACGGCG TCGATTTCGT GCAAGAGAAC
GGCCCCGAGC GACTCGACCT GAAGCGTGCG CTCTATCGCC AGATGGACGA CGTGCTGCCC
GCGCACGTGC CGATCGCGTC GAGCTCGTCG GGCCTGAAGA TGTCCGAGAT CCAGACGGCC
TGCGCGAAGC ATCCGGAACG CTGCCTGATC GCGCATCCGT TCAATCCGCC GCACCTGATC
CCGCTCGTCG AGCTGGTCGG CGGCGACGCG ACCAGCCCGG ACGTGATCGC GCGCGTGAAG
CAGTTCTACG ATGCGCTCGG CAAGCAGACG ATCGTGCTGA ACAAGGAGAT GACCGGCCAC
GTGGCGAACC GGCTCGCGGC CGCGCTGTTC CGCGAGGTGT ATCACCTCGT CGGCGAAGGC
GTCGTGAGCG TCGCCGATGC GGACAAGGCG GTCGCGTGGG GCCCCGGCCT GCGCTGGGGG
CTGATGGGGC AGTGCCTGAC CTATCACCTC GGCGGCGGCG CGGGCGGGAT CGCGCACTTC
CTCGAACACC TGTCGGGGCC GATCACGAGC TGGTGGGACG ACCTCGGCAC GCCGTCGTTC
GATCCGGAAG TCGATCGCAA GCTGACCGAC GAGCTGCGCG CGATCCAGGG CGAGCGCTCG
ATGCAGGCAC TGGCAGCGGA GCGCGATCGG CTGCTCGTCG AACTGATCGA CGCGCGACGC
CGCAGCTTCC TGCCCTGA
 
Protein sequence
MDIRRIAIVG AGVIGASWAA FYLTQGFDVV ATDPAPQANA RLRDALAAFL GERAAELCAR 
LSFDADLVRA LDGVDFVQEN GPERLDLKRA LYRQMDDVLP AHVPIASSSS GLKMSEIQTA
CAKHPERCLI AHPFNPPHLI PLVELVGGDA TSPDVIARVK QFYDALGKQT IVLNKEMTGH
VANRLAAALF REVYHLVGEG VVSVADADKA VAWGPGLRWG LMGQCLTYHL GGGAGGIAHF
LEHLSGPITS WWDDLGTPSF DPEVDRKLTD ELRAIQGERS MQALAAERDR LLVELIDARR
RSFLP