Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0773 |
Symbol | |
ID | 4093294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 841516 |
End bp | 842538 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638014043 |
Product | histone deacetylase superfamily protein |
Protein accession | YP_620656 |
Protein GI | 107022329 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.493705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCT ATTTCCATCC CGAACAACTG CTGCACCATC CGCGCAGCTA CCTGTCGCGC GGCCAGATGC GCGAACCACA GGAGGTGCCC GAACGCGCGG CGCGGCTCGT CGCGGCCGTC CGGTCGATCG ACTTCGACGT GCGCGAGCCG GCCGATCGCG GCACCGCGCC GATCGCGGCC GTGCACGACA TGAACTACCT GCGCTTTCTC GAGGACGCGC ACCGCGACTG GAAGCAGATG CCTGACGACT GGGGTGACGA AGTGATGTCG AACGTGTTCG TGCGCGACCC GAACCCGCTG CGCGGCGTGC TCGCGAAGGC CGCGCGCTAC CTCGCCGACG GCAGTTGCCC GGTGGGCGCG AACACGTGGC GCGCGGCGTA CTGGTCCGCG CAGGGTGCGC TGGCGGCCGC GGCCGACGTC AACGACGGCG CACGCGAGGC GTACGCGCTG TGCCGGCCGC CCGGCCATCA CGCGCGGCGC GATGCGGCCG GCGGCTTCTG CTACCTGAAC AATGCGGCGA TCGCCGCGCA GGCGCTGCTC GGTCGCCATC GCCGCGTCGC GGTGCTCGAT ACCGACATGC ATCACGGACA GGGCGTGCAG GAGATCTTCT ACGGCCGCGA CGATGTGCTG TACGTGTCGA TTCACGGCGA CCCGACCAAC TTCTATCCGG TCGTCGCGGG CTACGAGGAA GAGACGGGGG CGGGCGCCGG CGACGGCTTC AACCTCAACC TGCCGATGCC GCACGGCGCG CCGGAGTCGG CATTCTTCGA GCGGCTCGAC GACGCGTTGC GTGCACTCGC GCGGTTCCAG CCCGATGCGC TCGTGCTTGC GCTCGGTTTC GACATCTACA AGGACGATCC GCAATCGCAG GTTGCGGTCA CGACCGACGG GTTCGGGCGG CTCGGCGGCG CGATCGGCGC GCTCGGGTTG CCGACGGTGA TCGTGCAGGA GGGCGGTTAT CACCTCGCGA GTCTCGAGGC GAACGCGCGC GCGTTTTTCG GCGGGTTTGC CGCCGGGCGC TGA
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Protein sequence | MKTYFHPEQL LHHPRSYLSR GQMREPQEVP ERAARLVAAV RSIDFDVREP ADRGTAPIAA VHDMNYLRFL EDAHRDWKQM PDDWGDEVMS NVFVRDPNPL RGVLAKAARY LADGSCPVGA NTWRAAYWSA QGALAAAADV NDGAREAYAL CRPPGHHARR DAAGGFCYLN NAAIAAQALL GRHRRVAVLD TDMHHGQGVQ EIFYGRDDVL YVSIHGDPTN FYPVVAGYEE ETGAGAGDGF NLNLPMPHGA PESAFFERLD DALRALARFQ PDALVLALGF DIYKDDPQSQ VAVTTDGFGR LGGAIGALGL PTVIVQEGGY HLASLEANAR AFFGGFAAGR
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