Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_0748 |
Symbol | |
ID | 4093571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 814516 |
End bp | 815715 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638014018 |
Product | major facilitator transporter |
Protein accession | YP_620631 |
Protein GI | 107022304 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.251921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACCA CCTCCACCGA CCGTCCGACC GACGCCGCCT CGCCCCACTA CTCGCGCAGC CTGCTGTTGC TGCTCGCGAC GATCGCGGGC GTATCGGTCG CGAACATCTA CTACAACCAG CCGCTGCTCG ACAGCTTCCG CGCGTCCTTT CCGGACGGCG CCTCGTGGAT CGGCGCGGTA CCGACCGCGA CGCAGCTCGG CTATGCGGCC GGCATGTTCC TGCTCGCGCC GCTCGGCGAC CGCTTCGATC GCCGCGGGCT GATCCTGCTG CAGATCGCCG GCCTGTCGAT CGCGCTGATC GTGGCGGCCA CCGCGCCGTC GCTCGTCGTG CTCGCGCTCG CGAGCCTCGC GATCGGCATC CTCGCGACCA TCGCGCAGCA GGCCGTGCCG TTCGCCGCCG AAATCGCGCC GCCGGCCGAA CGCGGCCACG CGGTCGGCAC CGTGATGAGC GGCCTGCTGC TCGGCATCCT GCTCGCGCGC ACCGCCGCCG GCTTCATCGC CGAGTATTTC GGCTGGCGCG CGGTGTTCGC CGCGTCGGTC GCGGCGCTCG TCGCGCTCGC CGTCGTGATC GTGCTGCGGC TGCCGCGCAG CTCGCCGACG TCGACGCTGT CGTACGGCAA GCTGCTCGGC TCGATGTGGG ATCTGGCCGT GGAACTGCGC GGGCTGCGCG AGGCATCGCT CACGGGCGCC GCGCTGTTCG CGGCGTTCAG CGCATTCTGG CCGGTGCTCA CGCTGCTGCT CGCCGGCGCG CCGTTCCATC TCGGCCCGCA GGCAGCCGGC CTGTTCGGAA TCGTCGGGGC CGCGGGCGCG CTCGCCGCAC CGTATGCAGG CCGCTCCGCG GACACGCGCG GCCCGCGCGC GGTCATCTCG CTCGCGATCG TGCTGCTCGC GCTGTCGTTC GTGATCTTCG CGCTGTCGGG GTCGAGCCTC GTCGGGCTCG TAATCGGCGT GATCGTGCTC GACGTGGGCG TACAGGCCGC GCAGATCTCG AACCAGTCGC GCATCTATGC GCTGAAGCCG GAGGCGCGCA GCCGCGTGAA CACGGTGTAC ATGGTGTGCT ATTTCATCGG CGGCGCGCTC GGCTCGTCGG CCGGCGTCGC CGCATGGCGC GCGTTCGGCT GGATCGGCAT GTGCGCGGCC GGGCTGCTGT TTACCGCACT CGCCGGCTGG TCCCACCATC GCGGCGGCCG GCGCGGCTGA
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Protein sequence | MSTTSTDRPT DAASPHYSRS LLLLLATIAG VSVANIYYNQ PLLDSFRASF PDGASWIGAV PTATQLGYAA GMFLLAPLGD RFDRRGLILL QIAGLSIALI VAATAPSLVV LALASLAIGI LATIAQQAVP FAAEIAPPAE RGHAVGTVMS GLLLGILLAR TAAGFIAEYF GWRAVFAASV AALVALAVVI VLRLPRSSPT STLSYGKLLG SMWDLAVELR GLREASLTGA ALFAAFSAFW PVLTLLLAGA PFHLGPQAAG LFGIVGAAGA LAAPYAGRSA DTRGPRAVIS LAIVLLALSF VIFALSGSSL VGLVIGVIVL DVGVQAAQIS NQSRIYALKP EARSRVNTVY MVCYFIGGAL GSSAGVAAWR AFGWIGMCAA GLLFTALAGW SHHRGGRRG
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