| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0732 |
|---|
| Symbol | |
|---|
| ID | 4092322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 790125 |
|---|
| End bp | 791492 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638014002 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_620615 |
|---|
| Protein GI | 107022288 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.486551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT TGCAGCGCCA CCTGAGCGCG CGGCACATCC GCTTTCTCGC GCTGGGCTCG
GCGATCGGTA CGGGCCTGTT CTACGGCTCC GCGTCCGCGA TCCAGCTTGC CGGCCCGGCC
GTGATCCTCG CGTACATCCT GGGCGGCGCG GCCGTCTACA TGGTGATGCG CGCGCTCGGC
GAGATGGCCG TGCGCGAACC CGTCGCCGGC TCGTTCGGCC ACTACGCGAC CGAGAACCTC
GGCCCCTTCG CGGGCTTCGT CACCGGCTGG ACCTACACGC TCGAAATGGT GATCGTCGCG
ATCGCGGACA TCACCGCGTT CGGCATCTAC ATGGGCTTCT GGTTTCCGGA CGTCCCGCAA
TGGATCTGGG TGCTCGGCGT CGTCGCGATC ATCTGCGGGC TGAACCTGTG CCACGTGAAA
GTGTTCGGCG AGCTCGAATT CTGGCTGTCG ATCATCAAGG TCGGCGCGAT CGTCGCAATG
ATCGGCGGCG GCGTCGCGAT CCTGCTGACC GGCATGCACT TCGGTCATTC GGCCGACTTG
CCGACGTTCG CGAACCTGTG GAACCACGGC GGCTTCTTGC CGAACGGCAT CGGCGGGCTG
ATCGCGTCGC TGTCGGTGGT GATCTTCGCG TACGGCGGGA TCGAGGTGAT CGGGATGAGC
GCCGGTGAGG CGAAGGACCC GGAACGCGTG ATTCCGCGCG CGATCAACGC GGTGCCCGCA
CGCATCCTGC TGTTCTACGT GCTGACGATG GTGGTGCTGA TGTCGATCAG CCCGTGGACG
GGTGTCGGCA GCGACGGCAG CCCGTTCGTG CAGATCTTCT CGGCGCTCGG CGTGAAATCG
GCCGCGACGA TCCTGAACCT CGTCGTGATC AGCGCGGCGA TCTCGGCGAT CAACAGCGAC
ATCTTCGGCG CGGGCCGGAT GATGTTCGGG ATGGCGCGGC AGGGTCAGGC GCCGCGCGTG
CTGATGACGA CATCGCGCCA CGGCGTGCCG TGGGTCACGG TGCTCGTGAT GGCCGGCGCG
CTGCTGGTGG GCGTGCTGCT CAACTACCTG ATGCCGAAGG ACGTGTTCCT GGTGGTCGCC
GCGATCGCGA CGTTCGCGAC CGTGTGGGTG TGGCTGATGA TCCTGCTGTC GCAGGTGGCG
ATGCGTCGCC GCCTGTCGAG TGCCGAAGTC GCCGCGCTGA AGTTCAAGGT GCCGCTGTGG
CCCGTCGCGC CCGCGCTGAC GATCGCCTTC ATGGGCTTCG TGATCGTGAT GCTCGGCTGG
TTCGAGGATA CGCGCGTGGC GCTGTATGTC GGCGCGGCAT GGCTCGCGCT GCTCGCGGCC
GTGTTCTACG CACGGATTCG CCCGAAATTC GCACCTGCGT CACGTTGA
|
|---|
| Protein sequence | MKNLQRHLSA RHIRFLALGS AIGTGLFYGS ASAIQLAGPA VILAYILGGA AVYMVMRALG
EMAVREPVAG SFGHYATENL GPFAGFVTGW TYTLEMVIVA IADITAFGIY MGFWFPDVPQ
WIWVLGVVAI ICGLNLCHVK VFGELEFWLS IIKVGAIVAM IGGGVAILLT GMHFGHSADL
PTFANLWNHG GFLPNGIGGL IASLSVVIFA YGGIEVIGMS AGEAKDPERV IPRAINAVPA
RILLFYVLTM VVLMSISPWT GVGSDGSPFV QIFSALGVKS AATILNLVVI SAAISAINSD
IFGAGRMMFG MARQGQAPRV LMTTSRHGVP WVTVLVMAGA LLVGVLLNYL MPKDVFLVVA
AIATFATVWV WLMILLSQVA MRRRLSSAEV AALKFKVPLW PVAPALTIAF MGFVIVMLGW
FEDTRVALYV GAAWLALLAA VFYARIRPKF APASR
|
|---|
| |