Gene Bcen_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0712 
Symbol 
ID4092830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp764235 
End bp764864 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content69% 
IMG OID638013982 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_620595 
Protein GI107022268 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.976883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGA AGGTACTGCT GATTGGCGCG ACCGGCCGGA CGGGCCAGGC CTGCGCGGAT 
CTGCTGCTGA AGCAGCCGGA GTTCGAGGTC ACGGCGCTCG TGCGCCGGCA CGGCTATGCG 
CTGGCGGGCG CACGGGTCGT CGAGGCCGAT CTGACGAACG ATTTCTCGCA CGCGTTCCAG 
GGCATCACGC ACGTGATCTA CACGGCAGGC TCGGCGGAAT CGGACGGTGC GACCGAAGAG 
GAGCAGGTCG ACCGCGACGC GGTCGCCCGC GCGGCCGACT ACGCGCTGGC CTACAACACG 
CAGAAGCTCG TGGTGGTCAG CTCGCTGTCC GCGTACCGGC CCGAGCAGGG CCCGGACGCG 
CTGCACCACT ATTCGCAGAT GAAGCGCGAA GGCGACGAGC GCGTGATCGC GTCGGGCGTC 
GACTATGTGA TCCTGCGCCC GGGCCCGCTC ACGGACGATC CGGGCGTCGG CAAGATCGCG 
CTGACCGACC GGTGGCTCGA GCCCGCGCCG CCCGTCTCGC GCCAGGATGT TGCATGGGCC 
GCGATCGAGG CGATCAAGCT CGGCATCTCG CGCAAGATCG TCGGCTTCGT CGGCGGCAGC 
GTGCCGATCG AACAGGCATT GCGCGCGTAA
 
Protein sequence
MTTKVLLIGA TGRTGQACAD LLLKQPEFEV TALVRRHGYA LAGARVVEAD LTNDFSHAFQ 
GITHVIYTAG SAESDGATEE EQVDRDAVAR AADYALAYNT QKLVVVSSLS AYRPEQGPDA 
LHHYSQMKRE GDERVIASGV DYVILRPGPL TDDPGVGKIA LTDRWLEPAP PVSRQDVAWA 
AIEAIKLGIS RKIVGFVGGS VPIEQALRA