| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0701 |
|---|
| Symbol | argD |
|---|
| ID | 4092819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 751557 |
|---|
| End bp | 752789 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638013971 |
|---|
| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
|---|
| Protein accession | YP_620584 |
|---|
| Protein GI | 107022257 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0520056 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCT CGACCGTGAC CCGCCAGACA TTCGACGAAG TGATGGTGCC GGTATTTTCT
CCCGCCCCGT TCGTGCCGGA TCGCGCAGAG GGCTCCCGCG TGTGGGACAC GGCCGGCCGC
GAGTACATCG ATTTCGCGTG CGGCATCGCG GTCACGTCAC TCGGCCACGG CCACCCGGAA
CTGCTGAAGG TGCTGGACGA ACAAGGCCGC AAGCTCTGGC ACATCGGCAA CGGCTACACG
AACGAACCGG TGCTGCGTCT CGCAAAGCGC CTGGAATCGC TGACCTTCGC CGATCGCGCG
TTCTTCGCGA ACTCGGGCGC GGAAGCGAAC GAAGCCGCAC TGAAGCTCGC ACGCCGCGTC
GCGTTCGACC GCCATGGCGC GGACAAATAC GAAATCGTGT CGTTCGTGCA GTCGTTCCAC
GGCCGCACGT TCTTCGCGGT CAGCGCCGGC GGTCAGCCGA AGTACTCGGA AGGCTTCGGC
CCGGTGCCGG AAGGCATCAA GCACCTGCCG TTCAACGACA TCGAAGCCGC GAAGGCCGCG
ATCGGCCCGA AAACCTGCGC CGTGATCGTC GAGCCGGTGC AAGGCGAAGG CGGCGTGATC
CCGGCCGATC CGGCGTTCCT GAAGGCACTG CGCGAAGCGT GCGACGCCAA CGGCGCACTG
CTGATTTTCG ATGAAGTGCA AACGGGCGTG GGCCGCACCG GCCAGTTCTA CGCCTACATG
GACACGGGCG TCACGCCGGA CATCCTGACG ACCGCGAAGG CGCTCGGCAA CGGCTTCCCG
ATCGGTGCGA TGCTGACGAC GAACGAACTG GCCGCGCACT TCAAGGTCGG CGTGCACGGC
ACGACGTATG GCGGCAATCC GCTCGCATCG GCAATCGCGG ACAAGGTCGT CGAACTGATC
GGCGACCCGG CGCTGCTCGA AGGCGTGCGC GAACGCAGCG TGCGCCTGAA GGGCGCGCTG
GAACGCATCA ACGCACGCTT CGGCATCTTC AAGGACGTGC GCGGCAAGGG CCTGCTGGTC
GGCGCGGAAC TCACCGCCGC ATTCGACGGC CGCGCGAAGG ACTTCGTCAC CGCGGCCGCC
GAGAACGGCC TGATCATGCT GATCGCCGGC CCGAACGTGC TGCGCTTCGT CCCGTCGCTG
GTGATCCCGT TCGACCTGCT CGACGAAGGC GTGAAGCGCT TCGAGAAAGC GGTCGAACAA
GTGCTCGCGG CCCAGGAAGC CACCGCGCGC TGA
|
|---|
| Protein sequence | MTTSTVTRQT FDEVMVPVFS PAPFVPDRAE GSRVWDTAGR EYIDFACGIA VTSLGHGHPE
LLKVLDEQGR KLWHIGNGYT NEPVLRLAKR LESLTFADRA FFANSGAEAN EAALKLARRV
AFDRHGADKY EIVSFVQSFH GRTFFAVSAG GQPKYSEGFG PVPEGIKHLP FNDIEAAKAA
IGPKTCAVIV EPVQGEGGVI PADPAFLKAL REACDANGAL LIFDEVQTGV GRTGQFYAYM
DTGVTPDILT TAKALGNGFP IGAMLTTNEL AAHFKVGVHG TTYGGNPLAS AIADKVVELI
GDPALLEGVR ERSVRLKGAL ERINARFGIF KDVRGKGLLV GAELTAAFDG RAKDFVTAAA
ENGLIMLIAG PNVLRFVPSL VIPFDLLDEG VKRFEKAVEQ VLAAQEATAR
|
|---|
| |