Gene Bcen_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0686 
Symbol 
ID4092804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp732482 
End bp733867 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content65% 
IMG OID638013956 
Productextracellular ligand-binding receptor 
Protein accessionYP_620569 
Protein GI107022242 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAAT CCGCATCGAA TGCGCGACAA ATTTCCAAGA CCCGCGCATA TCGGCGACCT 
ATATATCGAA GCAATCGGGG CTCTTCGCGG AGCCTGACGG GAGATGTTTC CGAGGATCAC
GATGCCGACC TCCCCGCCCG ATTCCGAGAA GCGGTCGAAC CGCCCGCCCG TCGCACGCGT
CCGGCCCGCC CAGGCGCGCG CGGTACCCAC TCGCCGGTGT CGAACAAGAG GAACAACATG
AAATTCCGTC ATTCCCTGCT GTCGGTGTCG ATTGCATCCG CGCTTGCCCT TCTGTCGCAA
CAGGCTGCCC AGGCCGCCGA CACAACCGAC GTGAAGGTCG GCTTCGCCGC GCCGCTCACG
GGCGTGAACG CCGGCTACGG CAAGGACCTG CAAAACGGCG TGCAGCTCGC GCTCGACGAT
GCAGCCGCGC AGAAAGTGCA GATCGCCGGC AAGCCTGCCC GCTTCAATCT CGTCGTGCAG
GACGACCAGG CCGACCCGCG CATCGGCGTG CAGGCCGCGC AGGCACTGGT CGACCAGAAC
GTGTCGGTCG TGGTCGGTCA CTTCAATTCG GGGACGACGA TTCCGGCGTC GGTGGTCTAC
GACAAGGCCG GCATTCCGGT GATCGACCCG GCCGCGACCA ACCCGACGCT CACGTCGCGC
GGGCTCGCGA ACATGTTCAT GGTGATCGCG ACCGATGGCC AGAATGCCGG CAACGCGGGC
AAGTACGCGG TCGAGGTGAC GAAGGCGAAG CGCATCGCGA TCATCGACGA CCGCACCGCG
TTCGGCCAGG GCGAAGCCGA CGAATTCGAG AAGGCCGTGA AGGCCGCCGG CGGCAACCTC
ATCGGTCGCG AGTTCACCAG CAACCAGGCG GTCGATTTCC GCGCGCAGAT CACGAGCCTG
AAGGCCAAGA ATCCCGACCT GATCTTCTTC GGCGGCCTCG ATTCGCTCGC CGCCAACTTC
ATCAAGCAAA TGCGTCAACT CGGGCTGAAC GCGCAATTCG TCGGCGGCGG CGGCGTGAAG
GACAACGAGT TCATCAAGAT CGCGGGGCCG GCCGCCGAAG GCGCGATGGC GTGGGAATAC
GGTCAGCCGC TCGACGAGCT GCCGCAGGGG AAGGATTTCG AGGCGCGCTT CAAGAAGCGC
TTCGGCGTCG ACGTGCTGTC GTATGCGCAG TTCGGCTATG ACGCGGCGTG GGCGGCGATC
AAGGCGATGC AGGCGGCCGG TTCGACCGAT CCGAAGGCCT ATCGCCCGGC GCTGAAGAAA
ATCGACTTCC CAGGCGTGAC CGGCCGCATC TCGTTCGCGA ACGACGGCTC GCTGAAGAGC
GGGATGTCGA CGCTGTACCA GGTGAAGAAC GGCGCGTGGA AGACGATCGT GACGAAGGGA
GGCTGA
 
Protein sequence
MRKSASNARQ ISKTRAYRRP IYRSNRGSSR SLTGDVSEDH DADLPARFRE AVEPPARRTR 
PARPGARGTH SPVSNKRNNM KFRHSLLSVS IASALALLSQ QAAQAADTTD VKVGFAAPLT
GVNAGYGKDL QNGVQLALDD AAAQKVQIAG KPARFNLVVQ DDQADPRIGV QAAQALVDQN
VSVVVGHFNS GTTIPASVVY DKAGIPVIDP AATNPTLTSR GLANMFMVIA TDGQNAGNAG
KYAVEVTKAK RIAIIDDRTA FGQGEADEFE KAVKAAGGNL IGREFTSNQA VDFRAQITSL
KAKNPDLIFF GGLDSLAANF IKQMRQLGLN AQFVGGGGVK DNEFIKIAGP AAEGAMAWEY
GQPLDELPQG KDFEARFKKR FGVDVLSYAQ FGYDAAWAAI KAMQAAGSTD PKAYRPALKK
IDFPGVTGRI SFANDGSLKS GMSTLYQVKN GAWKTIVTKG G