Gene Bcen_0680 details

Gene Information

• Locus tag: Bcen_0680
• ID: 4092798
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: -
• Start bp: 724670
• End bp: 726583
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638013950
• Product: ABC transporter related
• Protein accession: YP_620563
• Protein GI: 107022236
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGGATT ATTCAGTCCG AGCGAACGTC GGCCTGCGAT CCAGCCGCCC CGCTCAATCA 
CCGAATCACC GCACGCATAT TTTGGAATCT CTCACCCCTG CCCAGCGCAA CGCCCACAAC 
GCGAAGCTGT CGAGCTACGC GCACCGGCCG ATCGCGTTCC TGTTCCGCTA CATCCGCCTC 
CACCCGGTCG CGCACCTGGT CGTGCTCTGC AGCGTGCTGG CCGCCGTCGG CTGCGCGCTC 
GGCTCGCAAT ACGCGATCAA GCACCTGATC GACGTGCTGG CGACCGGACG CCATCACCCC 
GGCCCGCTGT GGAGCGCGTT CGCGCTGCTC GTCGGGCTGA TCGCGGCCGA CAACCTGCTG 
TGGCGCGTCG GCGGCTGGGT CGCCGCGCAC ACGTTCGTCG CGGTCACCGG CGACCTGCGG 
CGCGACCTGT TCCAGTATCT GATCGGCCAT TCGCCGACGT ATTACTCGGA GAAGCAGCCG 
GGCACGCTCG CCAGCCGCAT CACGGCCACG TCGAACGCGG TCTACACGTC GGAGAACACG 
ATGGCGTGGA ACGTGCTGCC GCCGTGCATC GCGGTGATGG GCGCGATCCT GATGATCATC 
GTCGTCAATC CGCTGATGGC GGCCGGCCTG CTCGGCTGTT CGGCCGTGCT GTCCGTCATC 
CTGTTCAAGC TCGCCGGCCG CGGCTCGGCG CGCCACCACG CATTCGCGGC GAAGGCCGCG 
GCGGTCGACG GCGAGCTCGT CGACGTGATC GGCAACATGG GCCTCGTGCG CGCGTTCGGG 
ATGACGCTGC GCGAACAGAA GCGCTTCAGC GCGACGGTGA AGGCCGAGAT GGACGCGCGC 
CAGCAGAGCC TGCTCTATCT CGAGAAGCTG CGGCTGCTGC ACGCGGTGAT CACCGCGATG 
CTGTCCGCCG GCCTGCTCGG CTGGGCGCTG TGGCTGTGGG ACCAGGGCCG CGCAACGTCG 
GGCGACATCG TGCTCGTCAG TTCGCTCGGC TTCACGATCC TGCACGGCAC GCGCGATCTC 
GCGGTCGCGC TCGTCGACGT CACGCAGCAC GTCGCGCGCC TGTCCGAGGC GGTGAAGACG 
CTGCTCGAAC CGCACGGGAT GCCCGACCGC TCGGACGCGC AGCCGCTGTC GGCCAAGGGC 
GGCCGCGTCG ACTTCGAGCG CGTGACGTTC GCGTACCCGC ACCGCCGCGC GATCCTCGAC 
CACTTCGACC TTCATATCGA GCCGGACCAG CGCGTCGGCC TGATCGGCAA GTCGGGCGCC 
GGCAAGTCGA CCGTGCTCGC GCTGCTGCAG CGCTTCTACG ACACGCAGGA CGGCGTCGTG 
AAGGTCGACG GCCAGGACGT GAAGGGCCTC ACGCAGGACA GCCTGCGCCA CGCGATCGCG 
CTGGTGCCGC AGGACATCTC GCTGCTGCAC CGGACGATCT ACGACAACAT CGCGTACGGC 
CGCCCCGACG CGACCCGCGA CGAAGTGCTC GCCGCCGCGC GCGACGCGCG CTGCGCGGAG 
TTCATCGAGG CGATGCCGGA AGGCTATGAC ACGATCGTCG GCGACCGCGG CGTCAAGCTG 
TCGGGCGGCC AGCGCCAGCG CATCGCGATC GCGCGCGCGA TCCTGAAGGA TGCGCCGATC 
CTGCTGCTCG ACGAAGCGAC GTCGGCGCTC GACAGCGCGT CCGAGGAAGC GATCCAGAGC 
GCGCTCGACC GCCTGATGGT CGGCCGCACG GTGATCGCGA TCGCGCACCG CCTGTCGACG 
CTGCGCAACT TCGACCGCAT CATCGTGATG AACAACGGCA AGGTGATCGA CGACGGCCCG 
CCCGACGTGC TGCGCAACCG CCCCGGCCTG TACCGCGACC TGCTTGCGAA ACAGCACGGC 
CGCCATCATG CGGCGCCCGA CGGCAACACG CCGACCGGCG AACGCGTGGC CTGA 

 

Protein sequence

MPDYSVRANV GLRSSRPAQS PNHRTHILES LTPAQRNAHN AKLSSYAHRP IAFLFRYIRL 
HPVAHLVVLC SVLAAVGCAL GSQYAIKHLI DVLATGRHHP GPLWSAFALL VGLIAADNLL 
WRVGGWVAAH TFVAVTGDLR RDLFQYLIGH SPTYYSEKQP GTLASRITAT SNAVYTSENT 
MAWNVLPPCI AVMGAILMII VVNPLMAAGL LGCSAVLSVI LFKLAGRGSA RHHAFAAKAA 
AVDGELVDVI GNMGLVRAFG MTLREQKRFS ATVKAEMDAR QQSLLYLEKL RLLHAVITAM 
LSAGLLGWAL WLWDQGRATS GDIVLVSSLG FTILHGTRDL AVALVDVTQH VARLSEAVKT 
LLEPHGMPDR SDAQPLSAKG GRVDFERVTF AYPHRRAILD HFDLHIEPDQ RVGLIGKSGA 
GKSTVLALLQ RFYDTQDGVV KVDGQDVKGL TQDSLRHAIA LVPQDISLLH RTIYDNIAYG 
RPDATRDEVL AAARDARCAE FIEAMPEGYD TIVGDRGVKL SGGQRQRIAI ARAILKDAPI 
LLLDEATSAL DSASEEAIQS ALDRLMVGRT VIAIAHRLST LRNFDRIIVM NNGKVIDDGP 
PDVLRNRPGL YRDLLAKQHG RHHAAPDGNT PTGERVA