Gene Bcen_0648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0648 
Symbol 
ID4093450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand+ 
Start bp693507 
End bp694124 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content70% 
IMG OID638013914 
Productanti sigma-E protein, RseA 
Protein accessionYP_620531 
Protein GI107022204 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGTCGG TCAATACGCA ATCGCAAGCG TGCTCGCGCG GCGAGCGCCT TTCCGCGCTG 
GTCGACGGCG AAATGTTCGA TGGCCCGGAT CACGGGCAGT TTCTGGCTGA GCTCGACCGC 
GCGGATCGCG CCGTGTGGGC CCATTACCAC CTGATCGGCG ATGCGCTGCG CTCGGACGAG 
CTCGCGCTGT CGCCCGCGCT GAGCGTCGCG TTCACCGCGC GCATGTCGGC GGCGCTCGAA 
AGCGAGCCGC ACCTGTTGGC ACCGGCGGCC GCGCCGGTCG CGCGCAAGCT GCTGTCGCTG 
CGCCGCCGTG TCGTGCCGGC ATTCGCGGTG GCCGCCGCGG CCGCCACGCT GACGTGGATC 
GTCGTCCCGC AGATGCAGAC GGCCGGTGCG CCGGGCGCCG TCCAGGTCGC GTCGACAGGC 
GCGCCGCAGA ACGGCAATCT GCAGCGCGTG ACGGTTGCGC AGGCATCGGC CCAGCCGGGC 
CTGCAGGACG TCAACATCAT TCGCGACGCC AGCCTCGACC AATACCTTGA AGCGCACCAG 
CAATTCGCCC AGCAGCCCGT CGTCACGGGT TCGATGCCGC TGATCCGCGC TGCCGTGACC 
ACCACGCCAG GCCAATAA
 
Protein sequence
MGSVNTQSQA CSRGERLSAL VDGEMFDGPD HGQFLAELDR ADRAVWAHYH LIGDALRSDE 
LALSPALSVA FTARMSAALE SEPHLLAPAA APVARKLLSL RRRVVPAFAV AAAAATLTWI 
VVPQMQTAGA PGAVQVASTG APQNGNLQRV TVAQASAQPG LQDVNIIRDA SLDQYLEAHQ 
QFAQQPVVTG SMPLIRAAVT TTPGQ