| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_0602 |
|---|
| Symbol | |
|---|
| ID | 4092726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 647863 |
|---|
| End bp | 649233 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638013867 |
|---|
| Product | peptidase U62, modulator of DNA gyrase |
|---|
| Protein accession | YP_620486 |
|---|
| Protein GI | 107022159 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCCA ATCTCGACGT ACAAGCGCGC TATTTCCCGC ACACGCAGGA CCAGCTCAAG
GAAATCGCGT CGGACATCCT TCGCCATGCG AAGGCGCTCG GCGCGACCGA CGCCGCGACC
GAAATCTCCG AGGGCGACGG CCTGTCGGTG TCGGTGCGCC GCGGCGAAGT CGAAACGATC
GAGCACAACC GCGACAAGAT GGTCGGCGTC ACCGTGTTCA TCGGCAAGAA GCGCGGCAAC
GCGAGCACGT CGGACTTCTC GCCGGCCGCG ATCAAGGATA CCGTCGCCGC CGCGTACAAC
ATCGCGCGCT TCACGGCCGA GGACGAAGCG GCCGGCCTCG CCGAGGCCGA GCTGCTCGAA
ACCGACCCGC GCGACCTCGA TCTGTACCAC CCGTGGGCGC TGAGCGCCGA CGAGGCCGTC
GAGCTCGCCC GCCGCGCGGA AGATGCCGCG TTCGCGGTCA GCCCGCAGAT CCGCAATTCG
GAAGGCGCGA GCGTGTCGGC GCAGCACTCG CAGTTCGTGC TGGCGACGTC GCGCGGCTTC
CTCGCCGGCT ATCCGTACTC GCGCCACTAC ATCGCATGCG CGCCGATCGC GGGTAGCGGC
CGTCACATGC AGCGCGACGA CTGGTATTCG TCGAAGCGCA GCGCGATCGA TCTCGCCGCG
CCCGAAGCGG TGGGCCGTTA CGCGGCCGAA CGCGCGCTTG CGCGGATGGG CGCGCGCCGT
CTCGACACGC GCAAGGTGCC CGTGCTGTTC GAGGCGCCGC TCGCGGCCGG CCTGCTCGGC
GCATTCGTGC AGGCGGTGAG CGGCGGTGCG CTGTATCGCA AGACGTCGTT CCTCGTCGAC
AGCCTCGGCA AGCCGGTGTT CGCGCCGCAC ATCCAGGTCG TCGAGGATCC GCACGTGCCG
CGCGCGATGG GCAGCGCGCC GTTCGACGAG GAAGGCGTGC GCACGCGGGC GCGCAGCGTC
GTGAAGGACG GCGTCGTCGA AGGCTATTTC CTGTCGACCT ATTCGGCACG CAAGCTCGGC
ACGCAAACCA CCGGCAACGC GGGCGGCTCG CACAACCTCG CGCTGCGCAG CTCGAACACG
CAGGCGGGCG ACGATTTCGA CGCGATGCTG AAGAAGCTCG GCACGGGTCT GCTGCTGACC
GAGCTGATGG GGCAGGGCGT GAACTACGTG ACGGGCGACT ATTCGCGCGG CGCGGCGGGC
TTCTGGGTGG AGAACGGCGT GATCCAGTAT CCGGTCGAGG AAATCACCGT TGCCAGCACG
CTGCAGGAGA TGTTCCGCCA TATCGTCGCG ATCGGTGCGG ATTCGCTCGT GCGCGGCACG
AAGGAAACCG GCTCGGTGCT GATCGAGCAG ATGACGATCG CAGGGCAGTA A
|
|---|
| Protein sequence | MAANLDVQAR YFPHTQDQLK EIASDILRHA KALGATDAAT EISEGDGLSV SVRRGEVETI
EHNRDKMVGV TVFIGKKRGN ASTSDFSPAA IKDTVAAAYN IARFTAEDEA AGLAEAELLE
TDPRDLDLYH PWALSADEAV ELARRAEDAA FAVSPQIRNS EGASVSAQHS QFVLATSRGF
LAGYPYSRHY IACAPIAGSG RHMQRDDWYS SKRSAIDLAA PEAVGRYAAE RALARMGARR
LDTRKVPVLF EAPLAAGLLG AFVQAVSGGA LYRKTSFLVD SLGKPVFAPH IQVVEDPHVP
RAMGSAPFDE EGVRTRARSV VKDGVVEGYF LSTYSARKLG TQTTGNAGGS HNLALRSSNT
QAGDDFDAML KKLGTGLLLT ELMGQGVNYV TGDYSRGAAG FWVENGVIQY PVEEITVAST
LQEMFRHIVA IGADSLVRGT KETGSVLIEQ MTIAGQ
|
|---|
| |